A compositional account of motifs, mechanisms, and dynamics in biochemical regulatory networks.
Rebekah AduddellJames P. FairbanksAmit KumarPablo S. OcalEvan PattersonBrandon T. ShapiroPublished in: Compositionality (2024)
Keyphrases
- regulatory networks
- systems biology
- gene regulatory networks
- transcription factors
- gene expression
- motif discovery
- microarray
- computational biology
- high throughput
- gene expression data
- biological systems
- biological data
- binding sites
- protein protein interactions
- microarray data
- biological sequences
- gene regulation
- network model
- component analysis
- dna sequences
- data sets
- sequence data
- biological networks
- biologically inspired
- computational models
- natural language processing
- machine learning