A sentence sliding window approach to extract protein annotations from biomedical articles.
Martin KrallingerMaria PadronAlfonso ValenciaPublished in: BMC Bioinform. (2005)
Keyphrases
- sliding window
- data streams
- medline abstracts
- fixed size
- window size
- streaming data
- stream data
- keywords
- scientific literature
- protein interaction
- window sizes
- gene ontology
- protein sequences
- amino acids
- protein structure
- limited memory
- news articles
- text mining
- natural language
- space efficient
- variable size
- protein protein interactions
- manually annotated
- continuous queries
- biological entities
- metadata
- exponential decay
- database
- biomedical literature
- automatic extraction
- data sets