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Are Automated Molecular Dynamics Simulations and Binding Free Energy Calculations Realistic Tools in Lead Optimization? An Evaluation of the Linear Interaction Energy (LIE) Method.

Eva StjernschantzJohn MareliusCarmen MedinaMicael JacobssonNico P. E. VermeulenChris Oostenbrink
Published in: J. Chem. Inf. Model. (2006)
Keyphrases
  • parameter estimation
  • similarity measure
  • objective function
  • prior knowledge
  • probabilistic model
  • cross validation
  • closed form
  • dynamic programming
  • higher order
  • mutual information
  • dynamical systems