SINA: Accurate high-throughput multiple sequence alignment of ribosomal RNA genes.
Elmar PruesseJörg PepliesFrank Oliver GlöcknerPublished in: Bioinform. (2012)
Keyphrases
- high throughput
- rna seq
- genome wide
- multiple sequence alignment
- systems biology
- microarray
- genomic data
- biological data
- genome scale
- gene expression
- secondary structure
- multiple alignment
- microarray data
- biological sequences
- analysis of gene expression
- protein sequences
- rna sequences
- microarray gene
- memory efficient
- gene expression data
- gene selection
- biological processes
- genome sequences
- genomic sequences
- escherichia coli
- gene ontology
- experimental conditions
- dna binding
- human genome
- computational biology
- single nucleotide polymorphisms
- genetic algorithm
- alternative splicing
- saccharomyces cerevisiae
- metabolic pathways
- gene expression profiles
- data acquisition
- protein protein interactions
- mass spectrometry
- cancer classification
- gene regulation
- regulatory networks
- transcription factors
- sequence alignment
- gene expression patterns
- biological networks
- molecular biology
- high throughput technologies
- gene regulatory networks