Motif Search in DNA Sequences Using Generalized Suffix Tree.
Anjali MohapatraP. M. MishraS. PadhyPublished in: ICIT (2007)
Keyphrases
- dna sequences
- suffix tree
- data structure
- pattern matching
- tandem repeats
- human genome
- dna computing
- dna sequencing
- disk resident
- suffix array
- string matching
- sequence patterns
- binding sites
- motif discovery
- index structure
- indexing structure
- biological sequences
- genomic sequences
- coding regions
- periodicity detection
- test collection
- information retrieval systems
- probabilistic model