Stochastic EM-based TFBS motif discovery with MITSU.
Alastair M. KilpatrickBruce WardStuart AitkenPublished in: Bioinform. (2014)
Keyphrases
- motif discovery
- binding sites
- dna sequences
- biological sequences
- transcription factor binding sites
- pattern discovery
- data mining tasks
- multiobjective optimization
- computational biology
- transcription factors
- dna binding
- data mining algorithms
- sequence data
- gene expression
- knowledge discovery
- statistical significance
- data mining
- multi objective
- k means
- biological data
- automatic extraction
- similarity search
- similarity measure