BpMatch: An Efficient Algorithm for a Segmental Analysis of Genomic Sequences.
Claudio FelicioliRoberto MarangoniPublished in: IEEE ACM Trans. Comput. Biol. Bioinform. (2012)
Keyphrases
- detection algorithm
- k means
- learning algorithm
- worst case
- computational complexity
- times faster
- optimization algorithm
- computationally efficient
- convergence rate
- matching algorithm
- computational cost
- experimental evaluation
- cost function
- significant improvement
- dynamic programming
- particle swarm optimization
- segmentation algorithm
- preprocessing
- multi dimensional
- simulated annealing
- linear programming
- hidden markov models
- clustering method
- tree structure
- search space
- lower bound