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HAVoC, a bioinformatic pipeline for reference-based consensus assembly and lineage assignment for SARS-CoV-2 sequences.

Phuoc Thien Truong NguyenIlya PlyusninTarja SironenOlli VapalahtiRavi KantTeemu Smura
Published in: BMC Bioinform. (2021)
Keyphrases
  • assembly line
  • hidden markov models
  • databases
  • sequential patterns
  • metadata
  • data sets
  • public health
  • long sequences
  • processing pipeline
  • pipeline architecture