An algorithm for computing the restriction scaffold assignment problem in computational biology.
Justin ColanninoGodfried T. ToussaintPublished in: Inf. Process. Lett. (2005)
Keyphrases
- computational biology
- learning algorithm
- computational cost
- preprocessing
- np hard
- dynamic programming
- expectation maximization
- detection algorithm
- optimization algorithm
- objective function
- search space
- cost function
- memory efficient
- matching algorithm
- computational complexity
- segmentation algorithm
- probabilistic model
- k means
- suffix tree
- string matching