Zheng Yuan

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 45

Top Topics

Question Answering

Chinese Word Segmentation

Top Venues

J. Biomed. Informatics

Publications

Keming Lu, Hongyi Yuan, Runji Lin, Junyang Lin, Zheng Yuan, Chang Zhou, Jingren Zhou
Routing to the Expert: Efficient Reward-guided Ensemble of Large Language Models. NAACL-HLT (2024)
Chengpeng Li, Zheng Yuan, Hongyi Yuan, Guanting Dong, Keming Lu, Jiancan Wu, Chuanqi Tan, Xiang Wang, Chang Zhou
MuggleMath: Assessing the Impact of Query and Response Augmentation on Math Reasoning. ACL (1) (2024)
Guanting Dong, Hongyi Yuan, Keming Lu, Chengpeng Li, Mingfeng Xue, Dayiheng Liu, Wei Wang, Zheng Yuan, Chang Zhou, Jingren Zhou
How Abilities in Large Language Models are Affected by Supervised Fine-tuning Data Composition. ACL (1) (2024)
Keming Lu, Hongyi Yuan, Zheng Yuan, Runji Lin, Junyang Lin, Chuanqi Tan, Chang Zhou, Jingren Zhou
#InsTag: Instruction Tagging for Analyzing Supervised Fine-tuning of Large Language Models. ICLR (2024)
Zheng Yuan, Hongyi Yuan, Chengpeng Li, Guanting Dong, Chuanqi Tan, Chang Zhou
Scaling Relationship on Learning Mathematical Reasoning with Large Language Models. CoRR (2023)
Hongyi Yuan, Zheng Yuan, Chuanqi Tan, Fei Huang, Songfang Huang
HyPe: Better Pre-trained Language Model Fine-tuning with Hidden Representation Perturbation. ACL (1) (2023)
Bryan Cai, Sihang Zeng, Yucong Lin, Zheng Yuan, Doudou Zhou, Lu Tian
Hierarchical Pretraining for Biomedical Term Embeddings. CoRR (2023)
Mingfeng Xue, Dayiheng Liu, Kexin Yang, Guanting Dong, Wenqiang Lei, Zheng Yuan, Chang Zhou, Jingren Zhou
OccuQuest: Mitigating Occupational Bias for Inclusive Large Language Models. CoRR (2023)
Hongyi Yuan, Keming Lu, Fei Huang, Zheng Yuan, Chang Zhou
Speculative Contrastive Decoding. CoRR (2023)
Keming Lu, Hongyi Yuan, Zheng Yuan, Runji Lin, Junyang Lin, Chuanqi Tan, Chang Zhou, Jingren Zhou
#InsTag: Instruction Tagging for Analyzing Supervised Fine-tuning of Large Language Models. CoRR (2023)
Zheng Yuan, Yaoyun Zhang, Chuanqi Tan, Wei Wang, Fei Huang, Songfang Huang
Molecular Geometry-aware Transformer for accurate 3D Atomic System modeling. CoRR (2023)
Hongyi Yuan, Keming Lu, Zheng Yuan
Exploring Partial Knowledge Base Inference in Biomedical Entity Linking. BioNLP@ACL (2023)
Zheng Yuan, Hongyi Yuan, Chuanqi Tan, Wei Wang, Songfang Huang, Fei Huang
RRHF: Rank Responses to Align Language Models with Human Feedback without tears. CoRR (2023)
Jinze Bai, Shuai Bai, Yunfei Chu, Zeyu Cui, Kai Dang, Xiaodong Deng, Yang Fan, Wenbin Ge, Yu Han, Fei Huang, Binyuan Hui, Luo Ji, Mei Li, Junyang Lin, Runji Lin, Dayiheng Liu, Gao Liu, Chengqiang Lu, Keming Lu, Jianxin Ma, Rui Men, Xingzhang Ren, Xuancheng Ren, Chuanqi Tan, Sinan Tan, Jianhong Tu, Peng Wang, Shijie Wang, Wei Wang, Shengguang Wu, Benfeng Xu, Jin Xu, An Yang, Hao Yang, Jian Yang, Shusheng Yang, Yang Yao, Bowen Yu, Hongyi Yuan, Zheng Yuan, Jianwei Zhang, Xingxuan Zhang, Yichang Zhang, Zhenru Zhang, Chang Zhou, Jingren Zhou, Xiaohuan Zhou, Tianhang Zhu
Qwen Technical Report. CoRR (2023)
Guanting Dong, Hongyi Yuan, Keming Lu, Chengpeng Li, Mingfeng Xue, Dayiheng Liu, Wei Wang, Zheng Yuan, Chang Zhou, Jingren Zhou
How Abilities in Large Language Models are Affected by Supervised Fine-tuning Data Composition. CoRR (2023)
Keming Lu, Peter Potash, Xihui Lin, Yuwen Sun, Zihan Qian, Zheng Yuan, Tristan Naumann, Tianxi Cai, Junwei Lu
Prompt Discriminative Language Models for Domain Adaptation. ClinicalNLP@ACL (2023)
Zhengyun Zhao, Yichen Tian, Zheng Yuan, Peng Zhao, Feng Xia, Sheng Yu
A machine learning method for improving liver cancer staging. J. Biomed. Informatics 137 (2023)
Qiao Jin, Zheng Yuan, Guangzhi Xiong, Qianlan Yu, Huaiyuan Ying, Chuanqi Tan, Mosha Chen, Songfang Huang, Xiaozhong Liu, Sheng Yu
Biomedical Question Answering: A Survey of Approaches and Challenges. ACM Comput. Surv. 55 (2) (2023)
Lei Huang, Zheng Yuan, Huihui Yan, Rong Sheng, Linjing Liu, Fuzhou Wang, Weidun Xie, Nanjun Chen, Fei Huang, Songfang Huang, Ka-Chun Wong, Yaoyun Zhang
DiffDTM: A conditional structure-free framework for bioactive molecules generation targeted for dual proteins. CoRR (2023)
Keming Lu, Hongyi Yuan, Runji Lin, Junyang Lin, Zheng Yuan, Chang Zhou, Jingren Zhou
Routing to the Expert: Efficient Reward-guided Ensemble of Large Language Models. CoRR (2023)
Zheng Yuan, Hongyi Yuan, Chuanqi Tan, Wei Wang, Songfang Huang
How well do Large Language Models perform in Arithmetic tasks? CoRR (2023)
Chengpeng Li, Zheng Yuan, Hongyi Yuan, Guanting Dong, Keming Lu, Jiancan Wu, Chuanqi Tan, Xiang Wang, Chang Zhou
Query and Response Augmentation Cannot Help Out-of-domain Math Reasoning Generalization. CoRR (2023)
Hongyi Yuan, Keming Lu, Zheng Yuan
Exploring Partial Knowledge Base Inference in Biomedical Entity Linking. CoRR (2023)
Zheng Yuan, Qiao Jin, Chuanqi Tan, Zhengyun Zhao, Hongyi Yuan, Fei Huang, Songfang Huang
RAMM: Retrieval-augmented Biomedical Visual Question Answering with Multi-modal Pre-training. CoRR (2023)
Zheng Yuan, Chuanqi Tan, Songfang Huang, Fei Huang
Fusing Heterogeneous Factors with Triaffine Mechanism for Nested Named Entity Recognition. ACL (Findings) (2022)
Ningyu Zhang, Mosha Chen, Zhen Bi, Xiaozhuan Liang, Lei Li, Xin Shang, Kangping Yin, Chuanqi Tan, Jian Xu, Fei Huang, Luo Si, Yuan Ni, Guotong Xie, Zhifang Sui, Baobao Chang, Hui Zong, Zheng Yuan, Linfeng Li, Jun Yan, Hongying Zan, Kunli Zhang, Buzhou Tang, Qingcai Chen
CBLUE: A Chinese Biomedical Language Understanding Evaluation Benchmark. ACL (1) (2022)
Zheng Yuan, Chuanqi Tan, Songfang Huang
Code Synonyms Do Matter: Multiple Synonyms Matching Network for Automatic ICD Coding. ACL (2) (2022)
Hongyi Yuan, Zheng Yuan, Sheng Yu
Generative Biomedical Entity Linking via Knowledge Base-Guided Pre-training and Synonyms-Aware Fine-tuning. CoRR (2022)
Sihang Zeng, Zheng Yuan, Sheng Yu
Automatic Biomedical Term Clustering by Learning Fine-grained Term Representations. CoRR (2022)
Sheng Yu, Zheng Yuan, Jun Xia, Shengxuan Luo, Huaiyuan Ying, Sihang Zeng, Jingyi Ren, Hongyi Yuan, Zhengyun Zhao, Yucong Lin, Keming Lu, Jing Wang, Yutao Xie, Heung-Yeung Shum
BIOS: An Algorithmically Generated Biomedical Knowledge Graph. CoRR (2022)
Hongyi Yuan, Zheng Yuan, Ruyi Gan, Jiaxing Zhang, Yutao Xie, Sheng Yu
BioBART: Pretraining and Evaluation of A Biomedical Generative Language Model. BioNLP@ACL (2022)
Sihang Zeng, Zheng Yuan, Sheng Yu
Automatic Biomedical Term Clustering by Learning Fine-grained Term Representations. BioNLP@ACL (2022)
Hongyi Yuan, Zheng Yuan, Chuanqi Tan, Fei Huang, Songfang Huang
SeqDiffuSeq: Text Diffusion with Encoder-Decoder Transformers. CoRR (2022)
Hongyi Yuan, Zheng Yuan, Chuanqi Tan, Fei Huang, Songfang Huang
HyPe: Better Pre-trained Language Model Fine-tuning with Hidden Representation Perturbation. CoRR (2022)
Hongyi Yuan, Zheng Yuan, Ruyi Gan, Jiaxing Zhang, Yutao Xie, Sheng Yu
BioBART: Pretraining and Evaluation of A Biomedical Generative Language Model. CoRR (2022)
Hongyi Yuan, Zheng Yuan, Sheng Yu
Generative Biomedical Entity Linking via Knowledge Base-Guided Pre-training and Synonyms-Aware Fine-tuning. NAACL-HLT (2022)
Zheng Yuan, Zhengyun Zhao, Haixia Sun, Jiao Li, Fei Wang, Sheng Yu
CODER: Knowledge-infused cross-lingual medical term embedding for term normalization. J. Biomed. Informatics 126 (2022)
Zheng Yuan, Yijia Liu, Chuanqi Tan, Songfang Huang, Fei Huang
Improving Biomedical Pretrained Language Models with Knowledge. CoRR (2021)
Qiao Jin, Zheng Yuan, Guangzhi Xiong, Qianlan Yu, Chuanqi Tan, Mosha Chen, Songfang Huang, Xiaozhong Liu, Sheng Yu
Biomedical Question Answering: A Comprehensive Review. CoRR (2021)
Qiao Jin, Chuanqi Tan, Zhengyun Zhao, Zheng Yuan, Songfang Huang
Alibaba DAMO Academy at TREC Clinical Trials 2021: ExploringEmbedding-based First-stage Retrieval with TrialMatcher. TREC (2021)
Zheng Yuan, Chuanqi Tan, Songfang Huang, Fei Huang
Fusing Heterogeneous Factors with Triaffine Mechanism for Nested Named Entity Recognition. CoRR (2021)
Zheng Yuan, Yijia Liu, Chuanqi Tan, Songfang Huang, Fei Huang
Improving Biomedical Pretrained Language Models with Knowledge. BioNLP@NAACL-HLT (2021)
Ningyu Zhang, Zhen Bi, Xiaozhuan Liang, Lei Li, Xiang Chen, Shumin Deng, Luoqiu Li, Xin Xie, Hongbin Ye, Xin Shang, Kangping Yin, Chuanqi Tan, Jian Xu, Mosha Chen, Fei Huang, Luo Si, Yuan Ni, Guotong Xie, Zhifang Sui, Baobao Chang, Hui Zong, Zheng Yuan, Linfeng Li, Jun Yan, Hongying Zan, Kunli Zhang, Huajun Chen, Buzhou Tang, Qingcai Chen
CBLUE: A Chinese Biomedical Language Understanding Evaluation Benchmark. CoRR (2021)
Zheng Yuan, Yuanhao Liu, Qiuyang Yin, Boyao Li, Xiaobin Feng, Guoming Zhang, Sheng Yu
Unsupervised multi-granular Chinese word segmentation and term discovery via graph partition. J. Biomed. Informatics 110 (2020)
Zheng Yuan, Zhengyun Zhao, Sheng Yu
CODER: Knowledge infused cross-lingual medical term embedding for term normalization. CoRR (2020)