Yutaka Maruyama

Publication Activity (10 Years)

Years Active: 2012-2024
Publications (10 Years): 9

Top Topics

Variational Formulation

Energy Functional

Mumford Shah Functional

Euler Lagrange Equations

Top Venues

J. Comput. Chem.

J. Chem. Inf. Model.

Publications

Yutaka Maruyama, Norio Yoshida
RISMiCal: A software package to perform fast RISM/3D-RISM calculations. J. Comput. Chem. 45 (17) (2024)
Yutaka Maruyama, Ryo Igarashi, Yoshitaka Ushiku, Ayori Mitsutake
Analysis of Protein Folding Simulation with Moving Root Mean Square Deviation. J. Chem. Inf. Model. 63 (5) (2023)
Norio Yoshida, Yutaka Maruyama, Ayori Mitsutake, Akiyoshi Kuroda, Ryo Fujiki, Kodai Kanemaru, Daisuke Okamoto, Alexander E. Kobryn, Sergey Gusarov, Haruyuki Nakano
Computational Analysis of the SARS-CoV-2 RBD-ACE2-Binding Process Based on MD and the 3D-RISM Theory. J. Chem. Inf. Model. 62 (11) (2022)
Tetsuya Odajima, Yuetsu Kodama, Miwako Tsuji, Motohiko Matsuda, Yutaka Maruyama, Mitsuhisa Sato
Preliminary Performance Evaluation of the Fujitsu A64FX Using HPC Applications. CLUSTER (2020)
Tomonari Sumi, Yutaka Maruyama, Ayori Mitsutake, Kenji Mochizuki, Kenichiro Koga
Application of reference-modified density functional theory: Temperature and pressure dependences of solvation free energy. J. Comput. Chem. 39 (4) (2018)
Takayuki Muranushi, Seiya Nishizawa, Hirofumi Tomita, Keigo Nitadori, Masaki Iwasawa, Yutaka Maruyama, Hisashi Yashiro, Yoshifumi Nakamura, Hideyuki Hotta, Junichiro Makino, Natsuki Hosono, Hikaru Inoue
Automatic generation of efficient codes from mathematical descriptions of stencil computation. FHPC@ICFP (2016)
Takayuki Muranushi, Hideyuki Hotta, Junichiro Makino, Seiya Nishizawa, Hirofumi Tomita, Keigo Nitadori, Masaki Iwasawa, Natsuki Hosono, Yutaka Maruyama, Hikaru Inoue, Hisashi Yashiro, Yoshifumi Nakamura
Simulations of below-ground dynamics of fungi: 1.184 pflops attained by automated generation and autotuning of temporal blocking codes. SC (2016)
Tomonari Sumi, Ayori Mitsutake, Yutaka Maruyama
Erratum: "A solvation-free-energy functional: A reference-modified density functional formulation" [J. Comput. Chem 36, 1359-1369]. J. Comput. Chem. 36 (26) (2015)
Tomonari Sumi, Ayori Mitsutake, Yutaka Maruyama
A solvation-free-energy functional: A reference-modified density functional formulation. J. Comput. Chem. 36 (18) (2015)
Yutaka Maruyama, Norio Yoshida, Hiroto Tadano, Daisuke Takahashi, Mitsuhisa Sato, Fumio Hirata
Massively parallel implementation of 3D-RISM calculation with volumetric 3D-FFT. J. Comput. Chem. 35 (18) (2014)
Akira Nukada, Yutaka Maruyama, Satoshi Matsuoka
High performance 3-D FFT using multiple CUDA GPUs. GPGPU@ASPLOS (2012)