Yongwook Choi

Publication Activity (10 Years)

Years Active: 2006-2021
Publications (10 Years): 1

Top Topics

Sequence Alignment

Protein Structure

Top Venues

IEEE Trans. Inf. Theory

Electron. J. Comb.

Publications

Josh L. Espinoza, Chris L. Dupont, Aubrie O'Rourke, Sinem Beyhan, Pavel Morales, Amy Spoering, Kirsten J. Meyer, Agnes P. Chan, Yongwook Choi, William C. Nierman, Kim Lewis, Karen E. Nelson
Predicting antimicrobial mechanism-of-action from transcriptomes: A generalizable explainable artificial intelligence approach. PLoS Comput. Biol. 17 (3) (2021)
Yongwook Choi, Agnes P. Chan
PROVEAN web server: a tool to predict the functional effect of amino acid substitutions and indels. Bioinform. 31 (16) (2015)
Yongwook Choi
A fast computation of pairwise sequence alignment scores between a protein and a set of single-locus variants of another protein. BCB (2012)
Yongwook Choi, Wojciech Szpankowski
Compression of Graphical Structures: Fundamental Limits, Algorithms, and Experiments. IEEE Trans. Inf. Theory 58 (2) (2012)
Yongwook Choi, Charles Knessl, Wojciech Szpankowski
On a Recurrence Arising in Graph Compression. Electron. J. Comb. 19 (3) (2012)
Yongwook Choi, Wojciech Szpankowski
Constrained pattern matching. ACM Trans. Algorithms 7 (2) (2011)
Yongwook Choi
Fast Algorithm for Optimal Compression of Graphs. ANALCO (2010)
Yongwook Choi, Gopal Pandurangan, Maleq Khan, V. S. Anil Kumar
Energy-Optimal Distributed Algorithms for Minimum Spanning Trees. IEEE J. Sel. Areas Commun. 27 (7) (2009)
Yongwook Choi, Wojciech Szpankowski
Compression of graphical structures. ISIT (2009)
Yongwook Choi, Wojciech Szpankowski
Large deviations for constrained pattern matching. ISIT (2008)
Yongwook Choi, Maleq Khan, V. S. Anil Kumar, Gopal Pandurangan
Energy-optimal distributed algorithms for minimum spanning trees. SPAA (2008)
Yongwook Choi, Wojciech Szpankowski
Pattern Matching in Constrained Sequences. ISIT (2007)
Alberto Apostolico, Yongwook Choi
Compressing with Collapsible Tries. ITW (2006)
Alberto Apostolico, Yongwook Choi
Textual Compression by Collapsible Tries. DCC (2006)