Yana A. Sharapova

Publication Activity (10 Years)

Years Active: 2018-2022
Publications (10 Years): 8

Top Topics

Molecular Dynamics

Protein Families

High Performance Computing

Top Venues

Nucleic Acids Res.

J. Bioinform. Comput. Biol.

Comput. Biol. Medicine

Publications

Yana A. Sharapova, Dmitry A. Suplatov
plays the role of an active site lid and is associated with allosteric regulation. Comput. Biol. Medicine 144 (2022)
Dmitry A. Suplatov, Maksim V. Shegay, Yana A. Sharapova, Ivan Timokhin, Nina Popova, Vladimir V. Voevodin, Vytas K. Svedas
Co-designing HPC-systems by computing capabilities and management flexibility to accommodate bioinformatic workflows at different complexity levels. J. Supercomput. 77 (11) (2021)
Dmitry A. Suplatov, Yana A. Sharapova, Vytas K. Svedas
EasyAmber: A comprehensive toolbox to automate the molecular dynamics simulation of proteins. J. Bioinform. Comput. Biol. 18 (6) (2020)
Dmitry A. Suplatov, Yana A. Sharapova, Elizaveta Geraseva, Vytas K. Svedas
Zebra2: advanced and easy-to-use web-server for bioinformatic analysis of subfamily-specific and conserved positions in diverse protein superfamilies. Nucleic Acids Res. 48 (Webserver-Issue) (2020)
Dmitry A. Suplatov, Daria Timonina, Yana A. Sharapova, Vytas K. Svedas
Yosshi: a web-server for disulfide engineering by bioinformatic analysis of diverse protein families. Nucleic Acids Res. 47 (Webserver-Issue) (2019)
Dmitry A. Suplatov, Yana A. Sharapova, Maksim V. Shegay, Nina N. Popova, Kateryna Fesko, Vladimir V. Voevodin, Vytas K. Svedas
High-Performance Hybrid Computing for Bioinformatic Analysis of Protein Superfamilies. RuSCDays (2019)
Dmitry A. Suplatov, Yana A. Sharapova, Daria Timonina, Kirill E. Kopylov, Vytas K. Svedas
The visualCMAT: A web-server to select and interpret correlated mutations/co-evolving residues in protein families. J. Bioinform. Comput. Biol. 16 (2) (2018)
Yana A. Sharapova, Dmitry A. Suplatov, Vytas K. Svedas
Simulating the Long-timescale Structural Behavior of Bacterial and Influenza Neuraminidases with Different HPC Resources. Supercomput. Front. Innov. 5 (3) (2018)