Weihua Geng

Publication Activity (10 Years)

Years Active: 2011-2024
Publications (10 Years): 12

Top Topics

Regularization Methods

Genetic Networks

Poisson Process

Top Venues

J. Comput. Phys.

Commun. Inf. Syst.

Comput. Phys. Commun.

Publications

Sheik Ahmed Ullah, Xin Yang, Benjamin Jones, Shan Zhao, Weihua Geng, Guo-Wei Wei
Bridging Eulerian and Lagrangian Poisson-Boltzmann solvers by ESES. J. Comput. Chem. 45 (6) (2024)
Xin Yang, Elyssa Sliheet, Reece Iriye, Daniel Reynolds, Weihua Geng
Optimized parallelization of boundary integral Poisson-Boltzmann solvers. Comput. Phys. Commun. 299 (2024)
Zhen Chao, Weihua Geng, Robert Krasny
Integral equation method for the 1D steady-state Poisson-Nernst-Planck equations. CoRR (2023)
Jiahui Chen, Johannes Tausch, Weihua Geng
A Cartesian FMM-accelerated Galerkin boundary integral Poisson-Boltzmann solver. J. Comput. Phys. 478 (2023)
Leighton Wilson, Jingzhen Hu, Jiahui Chen, Robert Krasny, Weihua Geng
Computing electrostatic binding energy with the TABI Poisson-Boltzmann solver. Commun. Inf. Syst. 22 (2) (2022)
Sylvia Amihere, Weihua Geng, Shan Zhao
Benchmarking electrostatic free energy of the nonlinear Poisson-Boltzmann model for the Kirkwood sphere. Commun. Inf. Syst. 22 (3) (2022)
Jiahui Chen, Weihua Geng, Daniel R. Reynolds
Cyclically parallelized treecode for fast computations of electrostatic interactions on molecular surfaces. Comput. Phys. Commun. 260 (2021)
Jiahui Chen, Weihua Geng, Guo-Wei Wei
MLIMC: Machine learning-based implicit-solvent Monte Carlo. CoRR (2021)
Arum Lee, Weihua Geng, Shan Zhao
Regularization methods for the Poisson-Boltzmann equation: Comparison and accuracy recovery. J. Comput. Phys. 426 (2021)
Jiahui Chen, Weihua Geng
On preconditioning the treecode-accelerated boundary integral (TABI) Poisson-Boltzmann solver. J. Comput. Phys. 373 (2018)
Weihua Geng, Xin Yang
Role of combinatorial complexity in genetic networks. Commun. Inf. Syst. 18 (4) (2018)
Weihua Geng, Shan Zhao
A two-component Matched Interface and Boundary (MIB) regularization for charge singularity in implicit solvation. J. Comput. Phys. 351 (2017)
Jiahui Chen, Weihua Geng
Parallel Computing of the Adaptive N-Body Treecode Algorithm for Solving Boundary Integral Poisson-Boltzmann Equation. HPCA (China) (2015)
Weihua Geng
Parallel Higher-order Boundary Integral Electrostatics Computation on Molecular Surfaces with Curved Triangulation CoRR (2013)
Weihua Geng, Ferosh Jacob
A GPU-accelerated Direct-sum Boundary Integral Poisson-Boltzmann Solver CoRR (2013)
Weihua Geng
Parallel higher-order boundary integral electrostatics computation on molecular surfaces with curved triangulation. J. Comput. Phys. 241 (2013)
Weihua Geng, Ferosh Jacob
A GPU-accelerated direct-sum boundary integral Poisson-Boltzmann solver. Comput. Phys. Commun. 184 (6) (2013)
Weihua Geng, Robert Krasny
A treecode-accelerated boundary integral Poisson-Boltzmann solver for electrostatics of solvated biomolecules. J. Comput. Phys. 247 (2013)
Duan Chen, Zhan Chen, Changjun Chen, Weihua Geng, Guo-Wei Wei
MIBPB: A software package for electrostatic analysis. J. Comput. Chem. 32 (4) (2011)
Weihua Geng, Guo-Wei Wei
Multiscale molecular dynamics using the matched interface and boundary method. J. Comput. Phys. 230 (2) (2011)