Thomas O. McDonald

Publication Activity (10 Years)

Years Active: 2015-2020
Publications (10 Years): 5

Top Topics

Evolution Process

Parameter Settings

Markov Processes

Stochastic Processes

Top Venues

J. Appl. Probab.

Publications

James P. Roney, Jeremy Ferlic, Franziska Michor, Thomas O. McDonald
ESTIpop: a computational tool to simulate and estimate parameters for continuous-time Markov branching processes. Bioinform. 36 (15) (2020)
Jeremy Ferlic, Jiantao Shi, Thomas O. McDonald, Franziska Michor
DIFFpop: a stochastic computational approach to simulate differentiation hierarchies with single cell barcoding. Bioinform. 35 (19) (2019)
Thomas O. McDonald, Marek Kimmel
Multitype infinite-allele branching processes in continuous time. J. Appl. Probab. 54 (2) (2017)
Thomas O. McDonald, Franziska Michor
SIApopr: a computational method to simulate evolutionary branching trees for analysis of tumor clonal evolution. Bioinform. 33 (14) (2017)
Thomas O. McDonald, Marek Kimmel
A multitype infinite-allele branching process with applications to cancer evolution. J. Appl. Probab. 52 (3) (2015)