Taosheng Xu

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 18

Top Topics

Data Imputation

Partial Least Squares

Negative Matrix Factorization

Top Venues

PLoS Comput. Biol.

Publications

Xinlei Yu, Xinyang Li, Ruiquan Ge, Shibin Wu, Ahmed Elazab, Jichao Zhu, Lingyan Zhang, Gangyong Jia, Taosheng Xu, Xiang Wan, Changmiao Wang
ICHPro: Intracerebral Hemorrhage Prognosis Classification Via Joint-attention Fusion-based 3d Cross-modal Network. CoRR (2024)
Xiaoyu Li, Wenwen Min, Shunfang Wang, Changmiao Wang, Taosheng Xu
stMCDI: Masked Conditional Diffusion Model with Graph Neural Network for Spatial Transcriptomics Data Imputation. CoRR (2024)
Wenwen Min, Taosheng Xu, Xiang Wan, Tsung-Hui Chang
Structured Sparse Non-Negative Matrix Factorization With $\ell _{2,0}$ℓ2,0-Norm. IEEE Trans. Knowl. Data Eng. 35 (8) (2023)
Wenwen Min, Taosheng Xu, Chris Ding
Weighted Sparse Partial Least Squares for Joint Sample and Feature Selection. CoRR (2023)
Xiaoyu Li, Taosheng Xu, Jinyu Chen, Jun Wan, Wenwen Min
Multimodal attention-based variational autoencoder for clinical risk prediction. BIBM (2023)
Xiaomei Li, Buu Minh Thanh Truong, Taosheng Xu, Lin Liu, Jiuyong Li, Thuc Duy Le
Uncovering the roles of microRNAs/lncRNAs in characterising breast cancer subtypes and prognosis. BMC Bioinform. 22 (1) (2021)
Wenwen Min, Taosheng Xu, Xiang Wan, Tsung-Hui Chang
Structured Sparse Non-negative Matrix Factorization with L20-Norm for scRNA-seq Data Analysis. CoRR (2021)
Junpeng Zhang, Lin Liu, Taosheng Xu, Wu Zhang, Chunwen Zhao, Sijing Li, Jiuyong Li, Nini Rao, Thuc Duy Le
Exploring cell-specific miRNA regulation with single-cell miRNA-mRNA co-sequencing data. BMC Bioinform. 22 (1) (2021)
Xiaomei Li, Lin Liu, Gregory J. Goodall, Andreas Schreiber, Taosheng Xu, Jiuyong Li, Thuc Duy Le
A novel single-cell based method for breast cancer prognosis. PLoS Comput. Biol. 16 (8) (2020)
Junpeng Zhang, Taosheng Xu, Lin Liu, Wu Zhang, Chunwen Zhao, Sijing Li, Jiuyong Li, Nini Rao, Thuc Duy Le
LMSM: A modular approach for identifying lncRNA related miRNA sponge modules in breast cancer. PLoS Comput. Biol. 16 (4) (2020)
Junpeng Zhang, Vu Viet Hoang Pham, Lin Liu, Taosheng Xu, Buu Minh Thanh Truong, Jiuyong Li, Nini Rao, Thuc Duy Le
Correction to: Identifying miRNA synergism using multiple-intervention causal inference. BMC Bioinform. 21 (1) (2020)
Junpeng Zhang, Lin Liu, Taosheng Xu, Yong Xie, Chunwen Zhao, Jiuyong Li, Thuc Duy Le
miRspongeR: an R/Bioconductor package for the identification and analysis of miRNA sponge interaction networks and modules. BMC Bioinform. 20 (1) (2019)
Vu Viet Hoang Pham, Junpeng Zhang, Lin Liu, Buu Minh Thanh Truong, Taosheng Xu, Trung T. Nguyen, Jiuyong Li, Thuc Duy Le
Identifying miRNA-mRNA regulatory relationships in breast cancer with invariant causal prediction. BMC Bioinform. 20 (1) (2019)
Junpeng Zhang, Vu Viet Hoang Pham, Lin Liu, Taosheng Xu, Buu Minh Thanh Truong, Jiuyong Li, Nini Rao, Thuc Duy Le
Identifying miRNA synergism using multiple-intervention causal inference. BMC Bioinform. (23) (2019)
Taosheng Xu, Ning Su, Lin Liu, Junpeng Zhang, Hongqiang Wang, Weijia Zhang, Jie Gui, Kui Yu, Jiuyong Li, Thuc Duy Le
miRBaseConverter: an R/Bioconductor package for converting and retrieving miRNA name, accession, sequence and family information in different versions of miRBase. BMC Bioinform. (19) (2018)
Thuc Duy Le, Taosheng Xu, Lin Liu, Hu Shu, Tao Hoang, Jiuyong Li
ParallelPC: An R Package for Efficient Causal Exploration in Genomic Data. PAKDD (Workshops) (2018)
Thuc Duy Le, Junpeng Zhang, Lin Liu, Buu Minh Thanh Truong, Shu Hu, Taosheng Xu, Jiuyong Li
Identifying microRNA targets in epithelial-mesenchymal transition using joint-intervention causal inference. CSBio (2017)
Taosheng Xu, Thuc Duy Le, Lin Liu, Ning Su, Rujing Wang, Bing-Yu Sun, Antonio Colaprico, Gianluca Bontempi, Jiuyong Li
CancerSubtypes: an R/Bioconductor package for molecular cancer subtype identification, validation and visualization. Bioinform. 33 (19) (2017)