Soumyadeep Nandi

Publication Activity (10 Years)

Years Active: 2007-2021
Publications (10 Years): 2

Top Topics

Comparative Analysis

Transcription Factor Binding Sites

Computational Biology

Top Venues

J. Comput. Biol.

Publications

A. K. M. Firoj Mahmud, Nicolas Delhomme, Soumyadeep Nandi, Maria Fällman
ProkSeq for complete analysis of RNA-Seq data from prokaryotes. Bioinform. 37 (1) (2021)
A. K. M. Firoj Mahmud, Doo Yang, Per Stenberg, Ilya Ioshikhes, Soumyadeep Nandi
Exploring a Drosophila Transcription Factor Interaction Network to Identify Cis-Regulatory Modules. J. Comput. Biol. 27 (8) (2020)
Dhwani K. Desai, Soumyadeep Nandi, Prashant K. Srivastava, Andrew M. Lynn
ModEnzA: Accurate Identification of Metabolic Enzymes Using Function Specific Profile HMMs with Optimised Discrimination Threshold and Modified Emission Probabilities. Adv. Bioinformatics 2011 (2011)
Prashant K. Srivastava, Dhwani K. Desai, Soumyadeep Nandi, Andrew M. Lynn
HMM-ModE - Improved classification using profile hidden Markov models by optimising the discrimination threshold and modifying emission probabilities with negative training sequences. BMC Bioinform. 8 (2007)