Siu Hung Joshua Chan

Publication Activity (10 Years)

Years Active: 2011-2024
Publications (10 Years): 6

Top Topics

High Throughput

Community Members

Reinforcement Learning

Top Venues

PLoS Comput. Biol.

Publications

Parsa Ghadermazi, Siu Hung Joshua Chan
Microbial interactions from a new perspective: reinforcement learning reveals new insights into microbiome evolution. Bioinform. 40 (1) (2024)
Michael Shaffer, Mikayla A. Borton, Ben Bolduc, José P. Faria, Rory M. Flynn, Parsa Ghadermazi, Janaka N. Edirisinghe, Elisha M. Wood-Charlson, Christopher S. Miller, Siu Hung Joshua Chan, Matthew B. Sullivan, Christopher S. Henry, Kelly C. Wrighton
kb_DRAM: annotation and metabolic profiling of genomes with DRAM in KBase. Bioinform. 39 (4) (2023)
Jingyi Cai, Tianwei Tan, Siu Hung Joshua Chan
Predicting Nash equilibria for microbial metabolic interactions. Bioinform. 36 (24) (2021)
Siu Hung Joshua Chan, Lin Wang, Satyakam Dash, Costas D. Maranas
Accelerating flux balance calculations in genome-scale metabolic models by localizing the application of loopless constraints. Bioinform. 34 (24) (2018)
Siu Hung Joshua Chan, Margaret N. Simons, Costas D. Maranas
SteadyCom: Predicting microbial abundances while ensuring community stability. PLoS Comput. Biol. 13 (5) (2017)
Siu Hung Joshua Chan, Jingyi Cai, Lin Wang, Margaret N. Simons-Senftle, Costas D. Maranas
Standardizing biomass reactions and ensuring complete mass balance in genome-scale metabolic models. Bioinform. 33 (22) (2017)
Siu Hung Joshua Chan, Christian Solem, Peter Ruhdal Jensen, Ping Ji
Estimating biological elementary flux modes that decompose a flux distribution by the minimal branching property. Bioinform. 30 (22) (2014)
Siu Hung Joshua Chan, Ping Ji
Decomposing flux distributions into elementary flux modes in genome-scale metabolic networks. Bioinform. 27 (16) (2011)