Sandra Smit

Publication Activity (10 Years)

Years Active: 2015-2024
Publications (10 Years): 8

Top Topics

Tips And Tricks

Comparative Genomics

Efficient Inference

Top Venues

Briefings Bioinform.

EuroVis (Posters)

Publications

Astrid van den Brandt, Eef M. Jonkheer, Dirk-Jan M. van Workum, Huub van de Wetering, Sandra Smit, Anna Vilanova
PanVA: Pangenomic Variant Analysis. IEEE Trans. Vis. Comput. Graph. 30 (8) (2024)
Astrid van den Brandt, Eef M. Jonkheer, Dirk-Jan M. van Workum, Sandra Smit, Anna Vilanova
Visual Exploration of Genetic Sequence Variants in Pangenomes. EuroVis (Posters) (2022)
Eef M. Jonkheer, Dirk-Jan M. van Workum, Siavash Sheikhizadeh Anari, Balázs Brankovics, Jorn R. de Haan, Lidija Berke, Theo A. J. van der Lee, Dick de Ridder, Sandra Smit
PanTools v3: functional annotation, classification and phylogenomics. Bioinform. 38 (18) (2022)
Rens Holmer, Robin van Velzen, René Geurts, Ton Bisseling, Dick de Ridder, Sandra Smit
GeneNoteBook, a collaborative notebook for comparative genomics. Bioinform. 35 (22) (2019)
Siavash Sheikhizadeh, Dick de Ridder, M. Eric Schranz, Sandra Smit
Efficient inference of homologs in large eukaryotic pan-proteomes. BMC Bioinform. 19 (1) (2018)
Walter Pirovano, Marten Boetzer, Martijn F. L. Derks, Sandra Smit
NCBI-compliant genome submissions: tips and tricks to save time and money. Briefings Bioinform. 18 (2) (2017)
Siavash Sheikhizadeh, M. Eric Schranz, Mehmet Akdel, Dick de Ridder, Sandra Smit
PanTools: representation, storage and exploration of pan-genomic data. Bioinform. 32 (17) (2016)
Ke Lin, Sandra Smit, Guusje Bonnema, Gabino Sanchez-Perez, Dick de Ridder
Making the difference: integrating structural variation detection tools. Briefings Bioinform. 16 (5) (2015)