Samir Bhatt

Publication Activity (10 Years)

Years Active: 2013-2024
Publications (10 Years): 27

Top Topics

Stochastic Process

Top Venues

PLoS Comput. Biol.

Publications

Elizaveta Semenova, Swapnil Mishra, Samir Bhatt, Seth R. Flaxman, H. Juliette T. Unwin
Deep Learning and MCMC with aggVAE for Shifting Administrative Boundaries: Mapping Malaria Prevalence in Kenya. Epi UAI (2024)
Makkunda Sharma, Fan Yang, Duy-Nhat Vo, Esra Suel, Swapnil Mishra, Samir Bhatt, Oliver Fiala, William Rudgard, Seth R. Flaxman
KidSat: satellite imagery to map childhood poverty dataset and benchmark. CoRR (2024)
Shozen Dan, Yu Chen, Yining Chen, Melodie Monod, Veronika K. Jaeger, Samir Bhatt, André Karch, Oliver Ratmann
Estimating fine age structure and time trends in human contact patterns from coarse contact data: The Bayesian rate consistency model. PLoS Comput. Biol. 19 (6) (2023)
Matthew J. Penn, Neil Scheidwasser, Joseph Penn, Christl A Donnelly, David A Duchêne, Samir Bhatt
Leaping through tree space: continuous phylogenetic inference for rooted and unrooted trees. CoRR (2023)
Nicolas Banholzer, Thomas A. Mellan, H. Juliette T. Unwin, Stefan Feuerriegel, Swapnil Mishra, Samir Bhatt
A comparison of short-term probabilistic forecasts for the incidence of COVID-19 using mechanistic and statistical time series models. CoRR (2023)
Giovanni Charles, Timothy M. Wolock, Peter Winskill, Azra C. Ghani, Samir Bhatt, Seth R. Flaxman
Seq2Seq Surrogates of Epidemic Models to Facilitate Bayesian Inference. AAAI (2023)
Arash Mehrjou, Ashkan Soleymani, Amin Abyaneh, Samir Bhatt, Bernhard Schölkopf, Stefan Bauer
Pyfectious: An individual-level simulator to discover optimal containment policies for epidemic diseases. PLoS Comput. Biol. 19 (1) (2023)
Matthew J. Penn, Christl A. Donnelly, Samir Bhatt
Continuous football player tracking from discrete broadcast data. CoRR (2023)
Matthew J. Penn, Neil Scheidwasser, Mark P. Khurana, David A Duchêne, Christl A Donnelly, Samir Bhatt
Phylo2Vec: a vector representation for binary trees. CoRR (2023)
Rebecca K. Nash, Samir Bhatt, Anne Cori, Pierre Nouvellet
Estimating the epidemic reproduction number from temporally aggregated incidence data: A statistical modelling approach and software tool. PLoS Comput. Biol. 19 (8) (2023)
Xenia Miscouridou, Samir Bhatt, George O. Mohler, Seth R. Flaxman, Swapnil Mishra
Cox-Hawkes: doubly stochastic spatiotemporal Poisson processes. Trans. Mach. Learn. Res. 2023 (2023)
Elizaveta Semenova, Swapnil Mishra, Samir Bhatt, Seth R. Flaxman, H. Juliette T. Unwin
Deep learning and MCMC with aggVAE for shifting administrative boundaries: mapping malaria prevalence in Kenya. CoRR (2023)
Christian Morgenstern, Daniel J. Laydon, Charles Whittaker, Swapnil Mishra, David Haw, Samir Bhatt, Neil M. Ferguson
The interaction of transmission intensity, mortality, and the economy: a retrospective analysis of the COVID-19 pandemic. CoRR (2022)
Tomas Gavenciak, Joshua Teperowski Monrad, Gavin Leech, Mrinank Sharma, Sören Mindermann, Samir Bhatt, Jan Markus Brauner, Jan Kulveit
Seasonal variation in SARS-CoV-2 transmission in temperate climates: A Bayesian modelling study in 143 European regions. PLoS Comput. Biol. 18 (8) (2022)
Swapnil Mishra, Seth Flaxman, Tresnia Berah, Harrison Zhu, Mikko Pakkanen, Samir Bhatt
πVAE: a stochastic process prior for Bayesian deep learning with MCMC. Stat. Comput. 32 (6) (2022)
Xenia Miscouridou, Samir Bhatt, George Mohler, Seth Flaxman, Swapnil Mishra
Cox-Hawkes: doubly stochastic spatiotemporal Poisson processes. CoRR (2022)
Giovanni Charles, Timothy M. Wolock, Peter Winskill, Azra C. Ghani, Samir Bhatt, Seth Flaxman
Seq2Seq Surrogates of Epidemic Models to Facilitate Bayesian Inference. CoRR (2022)
Elizaveta Semenova, Yidan Xu, Adam Howes, Theo Rashid, Samir Bhatt, Swapnil Mishra, Seth Flaxman
Encoding spatiotemporal priors with VAEs for small-area estimation. CoRR (2021)
H. Juliette T. Unwin, Isobel Routledge, Seth Flaxman, Marian-Andrei Rizoiu, Shengjie Lai, Justin Cohen, Daniel J. Weiss, Swapnil Mishra, Samir Bhatt
Using Hawkes Processes to model imported and local malaria cases in near-elimination settings. PLoS Comput. Biol. 17 (4) (2021)
Iwona Hawryluk, Henrique Hoeltgebaum, Swapnil Mishra, Xenia Miscouridou, Ricardo P. Schnekenberg, Charles Whittaker, Michaela A. C. Vollmer, Seth Flaxman, Samir Bhatt, Thomas A. Mellan
Gaussian process nowcasting: application to COVID-19 mortality reporting. UAI (2021)
Michaela A. C. Vollmer, Ben Glampson, Thomas A. Mellan, Swapnil Mishra, Luca Mercuri, Ceire Costelloe, Robert Klaber, Graham S. Cooke, Seth Flaxman, Samir Bhatt
A unified machine learning approach to time series forecasting applied to demand at emergency departments. CoRR (2020)
Isobel Routledge, Shengjie Lai, Katherine E. Battle, Azra C. Ghani, Manuel Gomez-Rodriguez, Kyle Gustafson, Swapnil Mishra, Juliette Unwin, Joshua L. Proctor, Andrew J. Tatem, Zhongjie Li, Samir Bhatt
Tracking progress towards malaria elimination in China: Individual-level estimates of transmission and its spatiotemporal variation using a diffusion network approach. PLoS Comput. Biol. 16 (3) (2020)
Swapnil Mishra, Seth Flaxman, Samir Bhatt
πVAE: Encoding stochastic process priors with variational autoencoders. CoRR (2020)
Philip Milton, Emanuele Giorgi, Samir Bhatt
Spatial Analysis Made Easy with Linear Regression and Kernels. CoRR (2019)
Lars Lorch, Abir De, Samir Bhatt, William Trouleau, Utkarsh Upadhyay, Manuel Gomez-Rodriguez
Stochastic Optimal Control of Epidemic Processes in Networks. CoRR (2018)
Nicholas Graetz, Joseph Friedman, Aaron Osgood-Zimmerman, Roy Burstein, Molly H. Biehl, Chloe Shields, Jonathan F. Mosser, Daniel C. Casey, Aniruddha Deshpande, Lucas Earl, Robert C. Reiner, Sarah E. Ray, Nancy Fullman, Aubrey J. Levine, Rebecca W. Stubbs, Benjamin K. Mayala, Joshua Longbottom, Annie J. Browne, Samir Bhatt, Daniel J. Weiss, Peter W. Gething, Ali H. Mokdad, Stephen S. Lim, Christopher J. L. Murray, Emmanuela Gakidou, Simon I. Hay
Mapping local variation in educational attainment across Africa. Nat. 555 (7694) (2018)
Jayna Raghwani, Samir Bhatt, Oliver G. Pybus
Faster Adaptation in Smaller Populations: Counterintuitive Evolution of HIV during Childhood Infection. PLoS Comput. Biol. 12 (1) (2016)
Samir Bhatt, Peter W. Gething, Oliver J. Brady, Jane P. Messina, Andrew W. Farlow, Catherine L. Moyes, John M. Drake, John S. Brownstein, Anne Gatewood Hoen, Osman Sankoh, Monica F. Myers, Dylan B. George, Thomas Jaenisch, G. R. William Wint, Cameron P. Simmons, Thomas W. Scott, Jeremy J. Farrar, Simon I. Hay
The global distribution and burden of dengue. Nat. 496 (7446) (2013)