Samantha Petti

Publication Activity (10 Years)

Years Active: 2016-2023
Publications (10 Years): 16

Top Topics

Transition Probabilities

Independent Set

Top Venues

PLoS Comput. Biol.

Publications

Samantha Petti, Sean R. Eddy
Correction: Constructing Benchmark Test Sets for Biological Sequence Analysis Using Independent Set Algorithms. PLoS Comput. Biol. 19 (3) (2023)
Samantha Petti, Nicholas Bhattacharya, Roshan Rao, Justas Dauparas, Neil Thomas, Juannan Zhou, Alexander M. Rush, Peter K. Koo, Sergey Ovchinnikov
End-to-end learning of multiple sequence alignments with differentiable Smith-Waterman. Bioinform. 39 (1) (2023)
Samantha Petti, Sean R. Eddy
Constructing benchmark test sets for biological sequence analysis using independent set algorithms. PLoS Comput. Biol. 18 (3) (2022)
Samantha Petti, Santosh S. Vempala
Approximating sparse graphs: The random overlapping communities model. Random Struct. Algorithms 61 (4) (2022)
Tyler Helmuth, Will Perkins, Samantha Petti
Correlation decay for hard spheres via Markov chains. CoRR (2020)
Michael Anastos, Peleg Michaeli, Samantha Petti
Thresholds in Random Motif Graphs. APPROX-RANDOM (2019)
Samantha Petti, Santosh S. Vempala
Approximating Sparse Graphs: The Random Overlapping Communities Model. CoRR (2018)
Alan M. Frieze, Samantha Petti
Balanced allocation through random walk. Inf. Process. Lett. 131 (2018)
Colin Cooper, Alan M. Frieze, Samantha Petti
. ANALCO (2018)
Alan M. Frieze, Samantha Petti
Balanced Allocation Through Random Walk. CoRR (2017)
Colin Cooper, Alan M. Frieze, Samantha Petti
. CoRR (2017)
Satyan L. Devadoss, Samantha Petti
A Space of Phylogenetic Networks. SIAM J. Appl. Algebra Geom. 1 (1) (2017)
Samantha Petti, Santosh S. Vempala
Random Overlapping Communities: Approximating Motif Densities of Large Graphs. CoRR (2017)
Christos H. Papadimitriou, Samantha Petti, Santosh S. Vempala
Cortical Computation via Iterative Constructions. COLT (2016)
Christos H. Papadimitriou, Samantha Petti, Santosh S. Vempala
Cortical Computation via Iterative Constructions. CoRR (2016)
Satyan L. Devadoss, Samantha Petti
A Space of Phylogenetic Networks. CoRR (2016)