S. Chakra Chennubhotla

Publication Activity (10 Years)

Years Active: 2017-2023
Publications (10 Years): 12

Top Topics

Skeleton Extraction

Differential Diagnosis

Histopathological Images

Top Venues

Int. J. High Perform. Comput. Appl.

ECCV Workshops (1)

Publications

Abigail C. Dommer, Lorenzo Casalino, Fiona L. Kearns, Mia Rosenfeld, Nicholas Wauer, Surl-Hee Ahn, John Russo, A. Sofia F. Oliveira, Clare Morris, Anthony T. Bogetti, Anda Trifan, Alexander Brace, Terra Sztain, Austin Clyde, Heng Ma, S. Chakra Chennubhotla, Hyungro Lee, Matteo Turilli, Syma Khalid, Teresa Tamayo-Mendoza, Matthew Welborn, Anders S. Christensen, Daniel G. A. Smith, Zhuoran Qiao, Sai K. Sirumalla, Michael O'connor, Frederick R. Manby, Anima Anandkumar, David J. Hardy, James C. Phillips, Abraham C. Stern, Josh Romero, David Clark, Mitchell Dorrell, Tom Maiden, Lei Huang, John D. McCalpin, Christopher J. Woods, Alan Gray, Matt Williams, Bryan Barker, Harinda Rajapaksha, Richard Pitts, Tom Gibbs, John E. Stone, Daniel M. Zuckerman, Adrian J. Mulholland, Thomas Miller, Shantenu Jha, Arvind Ramanathan, Lillian T. Chong, Rommie E. Amaro
#COVIDisAirborne: AI-enabled multiscale computational microscopy of delta SARS-CoV-2 in a respiratory aerosol. Int. J. High Perform. Comput. Appl. 37 (1) (2023)
Anda Trifan, Defne Gorgun, Michael Salim, Zongyi Li, Alexander Brace, Maxim Zvyagin, Heng Ma, Austin Clyde, David Clark, David J. Hardy, Tom Burnley, Lei Huang, John D. McCalpin, Murali Emani, Hyenseung Yoo, Junqi Yin, Aristeidis Tsaris, Vishal Subbiah, Tanveer Raza, Jessica Liu, Noah Trebesch, Geoffrey Wells, Venkatesh Mysore, Tom Gibbs, James C. Phillips, S. Chakra Chennubhotla, Ian T. Foster, Rick Stevens, Anima Anandkumar, Venkatram Vishwanath, John E. Stone, Emad Tajkhorshid, Sarah A Harris, Arvind Ramanathan
Intelligent resolution: Integrating Cryo-EM with AI-driven multi-resolution simulations to observe the severe acute respiratory syndrome coronavirus-2 replication-transcription machinery in action. Int. J. High Perform. Comput. Appl. 36 (5-6) (2022)
Neelima Pulagam, Marcus Hill, Mojtaba Sedigh Fazli, Rachel Mattson, Meekail Zain, Andrew Durden, Frederick D. Quinn, S. Chakra Chennubhotla, Shannon P. Quinn
Classification of Diffuse Subcellular Morphologies. SciPy (2021)
Akash Parvatikar, Om Choudhary, Arvind Ramanathan, Rebekah Jenkins, Olga Navolotskaia, Gloria Carter, Akif Burak Tosun, Jeffrey L. Fine, S. Chakra Chennubhotla
Prototypical Models for Classifying High-Risk Atypical Breast Lesions. MICCAI (8) (2021)
Arvind Ramanathan, Heng Ma, Akash Parvatikar, S. Chakra Chennubhotla
Artificial intelligence techniques for integrative structural biology of intrinsically disordered proteins. CoRR (2020)
Akash Parvatikar, Om Choudhary, Arvind Ramanathan, Olga Navolotskaia, Gloria Carter, Akif Burak Tosun, Jeffrey L. Fine, S. Chakra Chennubhotla
Modeling Histological Patterns for Differential Diagnosis of Atypical Breast Lesions. MICCAI (5) (2020)
Marcus Hill, Mojtaba Sedigh Fazli, Rachel Mattson, Meekail Zain, Andrew Durden, Allyson T. Loy, Barbara Reaves, Abigail Courtney, Frederick D. Quinn, S. Chakra Chennubhotla, Shannon P. Quinn
Spectral Analysis of Mitochondrial Dynamics: A Graph-Theoretic Approach to Understanding Subcellular Pathology. SciPy (2020)
Brian Falkenstein, Adriana Kovashka, Seong Jae Hwang, S. Chakra Chennubhotla
Classifying Nuclei Shape Heterogeneity in Breast Tumors with Skeletons. ECCV Workshops (1) (2020)
Andrew Durden, Allyson T. Loy, Barbara Reaves, Mojtaba Sedigh Fazli, Abigail Courtney, Frederick D. Quinn, S. Chakra Chennubhotla, Shannon P. Quinn
Dynamic Social Network Modeling of Diffuse Subcellular Morphologies. SciPy (2018)
Luong Nguyen, Akif Burak Tosun, Jeffrey L. Fine, Adrian V. Lee, D. Lansing Taylor, S. Chakra Chennubhotla
Spatial Statistics for Segmenting Histological Structures in H&E Stained Tissue Images. IEEE Trans. Medical Imaging 36 (7) (2017)
Luong Nguyen, Akif Burak Tosun, Jeffrey L. Fine, D. Lansing Taylor, S. Chakra Chennubhotla
Architectural patterns for differential diagnosis of proliferative breast lesions from histopathological images. ISBI (2017)
Akif Burak Tosun, Luong Nguyen, Nathan Ong, Olga Navolotskaia, Gloria Carter, Jeffrey L. Fine, D. Lansing Taylor, S. Chakra Chennubhotla
Histological Detection of High-Risk Benign Breast Lesions from Whole Slide Images. MICCAI (2) (2017)