Ruslan N. Sharipov

Publication Activity (10 Years)

Years Active: 2007-2022
Publications (10 Years): 8

Top Topics

Systems Biology

Biomedical Data

Top Venues

Nucleic Acids Res.

J. Bioinform. Comput. Biol.

BMC Syst. Biol.

Publications

Fedor A. Kolpakov, Ilya R. Akberdin, Ilya Kiselev, Semyon Kolmykov, Yury V. Kondrakhin, Mikhail Kulyashov, Elena Kutumova, Sergey Pintus, Anna Ryabova, Ruslan N. Sharipov, Ivan S. Yevshin, Sergey Zhatchenko, Alexander E. Kel
BioUML - towards a universal research platform. Nucleic Acids Res. 50 (W1) (2022)
Semyon Kolmykov, Ivan S. Yevshin, Mikhail Kulyashov, Ruslan N. Sharipov, Yury V. Kondrakhin, Vsevolod J. Makeev, Ivan V. Kulakovskiy, Alexander E. Kel, Fedor A. Kolpakov
GTRD: an integrated view of transcription regulation. Nucleic Acids Res. 49 (Database-Issue) (2021)
Fedor A. Kolpakov, Ilya R. Akberdin, Timur A. Kashapov, llya Kiselev, Semyon Kolmykov, Yury V. Kondrakhin, Elena Kutumova, Nikita Mandrik, Sergey S. Pintus, Anna Ryabova, Ruslan N. Sharipov, Ivan S. Yevshin, Alexander E. Kel
BioUML: an integrated environment for systems biology and collaborative analysis of biomedical data. Nucleic Acids Res. 47 (Webserver-Issue) (2019)
Ivan S. Yevshin, Ruslan N. Sharipov, Semyon Kolmykov, Yury V. Kondrakhin, Fedor A. Kolpakov
GTRD: a database on gene transcription regulation - 2019 update. Nucleic Acids Res. 47 (Database-Issue) (2019)
Ivan V. Kulakovskiy, Ilya E. Vorontsov, Ivan S. Yevshin, Ruslan N. Sharipov, Alla D. Fedorova, Eugene I. Rumynskiy, Yulia A. Medvedeva, Arturo Magana-Mora, Vladimir B. Bajic, Dmitri A. Papatsenko, Fedor A. Kolpakov, Vsevolod J. Makeev
HOCOMOCO: towards a complete collection of transcription factor binding models for human and mouse via large-scale ChIP-Seq analysis. Nucleic Acids Res. 46 (Database-Issue) (2018)
Oxana A. Volkova, Yury V. Kondrakhin, Timur A. Kashapov, Ruslan N. Sharipov
Comparative analysis of protein-coding and long non-coding transcripts based on RNA sequence features. J. Bioinform. Comput. Biol. 16 (2) (2018)
Ivan S. Yevshin, Ruslan N. Sharipov, Tagir F. Valeev, Alexander E. Kel, Fedor A. Kolpakov
GTRD: a database of transcription factor binding sites identified by ChIP-seq experiments. Nucleic Acids Res. 45 (Database-Issue) (2017)
Oxana A. Volkova, Yury V. Kondrakhin, Ivan S. Yevshin, Tagir F. Valeev, Ruslan N. Sharipov
Assessment of translational importance of mammalian mRNA sequence features based on Ribo-Seq and mRNA-Seq data. J. Bioinform. Comput. Biol. 14 (2) (2016)
Elena Kutumova, Andrei Yu. Zinovyev, Ruslan N. Sharipov, Fedor A. Kolpakov
Model composition through model reduction: a combined model of CD95 and NF-κ. BMC Syst. Biol. 7 (2013)
Yury V. Kondrakhin, Ruslan N. Sharipov, Alexander E. Kel, Fedor A. Kolpakov
Identification of Differentially Expressed Genes by Meta-Analysis of Microarray Data on Breast Cancer. Silico Biol. 8 (5-6) (2008)
Fedor A. Kolpakov, Vladimir Poroikov, Ruslan N. Sharipov, Yury V. Kondrakhin, Alexey V. Zakharov, Alexey Lagunin, Luciano Milanesi, Alexander E. Kel
CYCLONET - an integrated database on cell cycle regulation and carcinogenesis. Nucleic Acids Res. 35 (Database-Issue) (2007)