Richard G. Posner

Publication Activity (10 Years)

Years Active: 2009-2022
Publications (10 Years): 4

Top Topics

Arabidopsis Thaliana

Signaling Pathways

Scoring Function

Top Venues

J. Cheminformatics

PLoS Comput. Biol.

Publications

Jacob Neumann, Yen Ting Lin, Abhishek Mallela, Ely F. Miller, Joshua Colvin, Abell T. Duprat, Ye Chen, William S. Hlavacek, Richard G. Posner
Implementation of a practical Markov chain Monte Carlo sampling algorithm in PyBioNetFit. Bioinform. 38 (6) (2022)
Keesha E. Erickson, Oleksii S. Rukhlenko, MD Shahinuzzaman, Kalina P. Slavkova, Yen Ting Lin, Ryan Suderman, Edward C. Stites, Marian Anghel, Richard G. Posner, Dipak Barua, Boris N. Kholodenko, William S. Hlavacek
Modeling cell line-specific recruitment of signaling proteins to the insulin-like growth factor 1 receptor. PLoS Comput. Biol. 15 (1) (2019)
Brandon R. Thomas, Lily A. Chylek, Joshua Colvin, Suman Sirimulla, Andrew H. A. Clayton, William S. Hlavacek, Richard G. Posner
BioNetFit: a fitting tool compatible with BioNetGen, NFsim and distributed computing environments. Bioinform. 32 (5) (2016)
Mathew R. Koebel, Grant Schmadeke, Richard G. Posner, Suman Sirimulla
AutoDock VinaXB: implementation of XBSF, new empirical halogen bond scoring function, into AutoDock Vina. J. Cheminformatics 8 (1) (2016)
Matthew S. Creamer, Edward C. Stites, Meraj Aziz, James A. Cahill, Chin Wee Tan, Michael E. Berens, Haiyong Han, Kimberly J. Bussey, Daniel D. Von Hoff, William S. Hlavacek, Richard G. Posner
Specification, annotation, visualization and simulation of a large rule-based model for ERBB receptor signaling. BMC Syst. Biol. 6 (2012)
Joshua Colvin, Michael I. Monine, Ryan N. Gutenkunst, William S. Hlavacek, Daniel D. Von Hoff, Richard G. Posner
RuleMonkey: software for stochastic simulation of rule-based models. BMC Bioinform. 11 (2010)
Bin Hu, G. Matthew Fricke, James R. Faeder, Richard G. Posner, William S. Hlavacek
GetBonNie for building, analyzing and sharing rule-based models. Bioinform. 25 (11) (2009)
Joshua Colvin, Michael I. Monine, James R. Faeder, William S. Hlavacek, Daniel D. Von Hoff, Richard G. Posner
Simulation of large-scale rule-based models. Bioinform. 25 (7) (2009)