Rhys Heffernan

Publication Activity (10 Years)

Years Active: 2014-2018
Publications (10 Years): 5

Top Topics

Protein Secondary Structure

Highly Accurate

Secondary Structure

Top Venues

J. Comput. Chem.

Briefings Bioinform.

Publications

Jaswinder Singh, Jack Hanson, Rhys Heffernan, Kuldip K. Paliwal, Yuedong Yang, Yaoqi Zhou
Detecting Proline and Non-Proline Cis Isomers in Protein Structures from Sequences Using Deep Residual Ensemble Learning. J. Chem. Inf. Model. 58 (9) (2018)
Yuedong Yang, Jianzhao Gao, Jihua Wang, Rhys Heffernan, Jack Hanson, Kuldip K. Paliwal, Yaoqi Zhou
Sixty-five years of the long march in protein secondary structure prediction: the final stretch? Briefings Bioinform. 19 (3) (2018)
Rhys Heffernan, Kuldip K. Paliwal, James G. Lyons, Jaswinder Singh, Yuedong Yang, Yaoqi Zhou
Single-sequence-based prediction of protein secondary structures and solvent accessibility by deep whole-sequence learning. J. Comput. Chem. 39 (26) (2018)
Rhys Heffernan, Yuedong Yang, Kuldip K. Paliwal, Yaoqi Zhou
Capturing non-local interactions by long short-term memory bidirectional recurrent neural networks for improving prediction of protein secondary structure, backbone angles, contact numbers and solvent accessibility. Bioinform. 33 (18) (2017)
Rhys Heffernan, Abdollah Dehzangi, James G. Lyons, Kuldip K. Paliwal, Alok Sharma, Jihua Wang, Abdul Sattar, Yaoqi Zhou, Yuedong Yang
Highly accurate sequence-based prediction of half-sphere exposures of amino acid residues in proteins. Bioinform. 32 (6) (2016)
Abdollah Dehzangi, Sohrab Sohrabi, Rhys Heffernan, Alok Sharma, James G. Lyons, Kuldip K. Paliwal, Abdul Sattar
Gram-positive and gram-negative subcellular localization using rotation forest and physicochemical-based features. BMC Bioinform. 16 (S-4) (2015)
James G. Lyons, Abdollah Dehzangi, Rhys Heffernan, Alok Sharma, Kuldip K. Paliwal, Abdul Sattar, Yaoqi Zhou, Yuedong Yang
Predicting backbone Cα angles and dihedrals from protein sequences by stacked sparse auto-encoder deep neural network. J. Comput. Chem. 35 (28) (2014)