Ramu Anandakrishnan

Publication Activity (10 Years)

Years Active: 2008-2023
Publications (10 Years): 5

Top Topics

Data Sets From Uci

Processing Units

Evolutionary Algorithm

Molecular Dynamics

Top Venues

Nucleic Acids Res.

PLoS Comput. Biol.

Publications

Sajal Dash, Mohammad Alaul Haque Monil, Junqi Yin, Ramu Anandakrishnan, Feiyi Wang
Distributing Simplex-Shaped Nested for-Loops to Identify Carcinogenic Gene Combinations. IPDPS (2023)
Sajal Dash, Qais Al-Hajri, Wu-chun Feng, Harold R. Garner, Ramu Anandakrishnan
Scaling Out a Combinatorial Algorithm for Discovering Carcinogenic Gene Combinations to Thousands of GPUs. IPDPS (2021)
Nicholas Kinney, Kyle Titus-Glover, Jonathan D. Wren, Robin T. Varghese, Pawel Michalak, Han Liao, Ramu Anandakrishnan, Arichanah Pulenthiran, Lin Kang, Harold R. Garner
CAGm: a repository of germline microsatellite variations in the 1000 genomes project. Nucleic Acids Res. 47 (Database-Issue) (2019)
Ramu Anandakrishnan, Robin T. Varghese, Nicholas Kinney, Harold R. Garner
Estimating the number of genetic mutations (hits) required for carcinogenesis based on the distribution of somatic mutations. PLoS Comput. Biol. 15 (3) (2019)
Ramu Anandakrishnan, Mayank Daga, Alexey Onufriev, Wu-chun Feng
Multiscale Approximation with Graphical Processing Units for Multiplicative Speedup in Molecular Dynamics. BCB (2016)
Ramu Anandakrishnan, Boris Aguilar, Alexey Onufriev
prediction and the preparation of biomolecular structures for atomistic molecular modeling and simulations. Nucleic Acids Res. 40 (Web-Server-Issue) (2012)
Ramu Anandakrishnan, Alexey Onufriev
approximation based on the natural organization of biomolecules for speeding up the computation of long range interactions. J. Comput. Chem. 31 (4) (2010)
Ramu Anandakrishnan, Alexey Onufriev
Analysis of Basic Clustering Algorithms for Numerical Estimation of Statistical Averages in Biomolecules. J. Comput. Biol. 15 (2) (2008)