Patrik Rydberg

Publication Activity (10 Years)

Years Active: 2010-2016
Publications (10 Years): 2

Top Topics

Pharmaceutical Industry

Semantic Structure

Top Venues

J. Chem. Inf. Model.

J. Cheminformatics

J. Comput. Aided Mol. Des.

Publications

Ola Spjuth, Patrik Rydberg, Egon L. Willighagen, Chris T. A. Evelo, Nina Jeliazkova
XMetDB: an open access database for xenobiotic metabolism. J. Cheminformatics 8 (1) (2016)
Rasmus Leth, Patrik Rydberg, Flemming Steen Jørgensen, Lars Olsen
Density Functional Theory Study on the Formation of Reactive Benzoquinone Imines by Hydrogen Abstraction. J. Chem. Inf. Model. 55 (3) (2015)
Jed Zaretzki, Charles Bergeron, Tao-wei Huang, Patrik Rydberg, S. Joshua Swamidass, Curt M. Breneman
RS-WebPredictor: a server for predicting CYP-mediated sites of metabolism on drug-like molecules. Bioinform. 29 (4) (2013)
Michal Rostkowski, Ola Spjuth, Patrik Rydberg
WhichCyp: prediction of cytochromes P450 inhibition. Bioinform. 29 (16) (2013)
Johannes Kirchmair, Mark J. Williamson, Avid M. Afzal, Jonathan D. Tyzack, Alison P. K. Choy, Andrew Howlett, Patrik Rydberg, Robert C. Glen
FAst MEtabolizer (FAME): A Rapid and Accurate Predictor of Sites of Metabolism in Multiple Species by Endogenous Enzymes. J. Chem. Inf. Model. 53 (11) (2013)
Alexander Chalikiopoulos, Stefanie Thiele, Mikkel Malmgaard-Clausen, Patrik Rydberg, Vignir Ísberg, Trond Ulven, Thomas M. Frimurer, Mette M. Rosenkilde, David E. Gloriam
Structure-Activity Relationships and Identification of Optmized CC-Chemokine Receptor CCR1, 5, and 8 Metal-Ion Chelators. J. Chem. Inf. Model. 53 (11) (2013)
Paulius Mikulskis, Samuel Genheden, Patrik Rydberg, Lars Sandberg, Lars Olsen, Ulf Ryde
Binding affinities in the SAMPL3 trypsin and host-guest blind tests estimated with the MM/PBSA and LIE methods. J. Comput. Aided Mol. Des. 26 (5) (2012)
Jed Zaretzki, Patrik Rydberg, Charles Bergeron, Kristin P. Bennett, Lars Olsen, Curt M. Breneman
RS-Predictor Models Augmented with SMARTCyp Reactivities: Robust Metabolic Regioselectivity Predictions for Nine CYP Isozymes. J. Chem. Inf. Model. 52 (6) (2012)
Jed Zaretzki, Charles Bergeron, Patrik Rydberg, Tao-wei Huang, Kristin P. Bennett, Curt M. Breneman
RS-Predictor: A New Tool for Predicting Sites of Cytochrome P450-Mediated Metabolism Applied to CYP 3A4. J. Chem. Inf. Model. 51 (7) (2011)
Patrik Rydberg, David E. Gloriam, Lars Olsen
The SMARTCyp cytochrome P450 metabolism prediction server. Bioinform. 26 (23) (2010)