Padmini Rangamani

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 12

Top Topics

Skeleton Extraction

Parameter Estimation

Sensitivity Analysis

Top Venues

PLoS Comput. Biol.

Comput. Biol. Medicine

J. Open Source Softw.

Publications

Ali Khalilimeybodi, Jeffrey J. Saucerman, Padmini Rangamani
Modeling cardiomyocyte signaling and metabolism predicts genotype-to-phenotype mechanisms in hypertrophic cardiomyopathy. Comput. Biol. Medicine 175 (2024)
Nathaniel J. Linden, Boris Kramer, Padmini Rangamani
Correction: Bayesian parameter estimation for dynamical models in systems biology. PLoS Comput. Biol. 19 (4) (2023)
Justin G. Laughlin, Jørgen S. Dokken, Henrik Nicolay Topnes Finsberg, Emmet A. Francis, Christopher T. Lee, Marie E. Rognes, Padmini Rangamani
SMART: Spatial Modeling Algorithms for Reactions and Transport. J. Open Source Softw. 8 (91) (2023)
Haleh Alimohamadi, Padmini Rangamani
Effective cell membrane tension protects red blood cells against malaria invasion. PLoS Comput. Biol. 19 (12) (2023)
María Hernández Mesa, Jonas van den Brink, William E. Louch, Kimberly J. McCabe, Padmini Rangamani
Nanoscale organization of ryanodine receptor distribution and phosphorylation pattern determines the dynamics of calcium sparks. PLoS Comput. Biol. 18 (6) (2022)
Nathaniel J. Linden, Boris Kramer, Padmini Rangamani
Bayesian parameter estimation for dynamical models in systems biology. PLoS Comput. Biol. 18 (10) (2022)
Cuncheng Zhu, Christopher T. Lee, Padmini Rangamani
Mem3DG: Modeling Membrane Mechanochemical Dynamics in 3D using Discrete Differential Geometry. CoRR (2021)
Haleh Alimohamadi, Alyson S. Smith, Roberta B. Nowak, Velia M. Fowler, Padmini Rangamani
Non-uniform distribution of myosin-mediated forces governs red blood cell membrane curvature through tension modulation. PLoS Comput. Biol. 16 (5) (2020)
Padmini Rangamani, Ali Behzadan, Michael J. Holst
Local sensitivity analysis of the 'Membrane shape equation' derived from the Helfrich energy. CoRR (2020)
Christopher T. Lee, Justin G. Laughlin, Nils Angliviel de La Beaumelle, Rommie E. Amaro, James Andrew McCammon, Ravi Ramamoorthi, Michael Holst, Padmini Rangamani
3D mesh processing using GAMer 2 to enable reaction-diffusion simulations in realistic cellular geometries. PLoS Comput. Biol. 16 (4) (2020)
Mariam Ordyan, Tom Bartol, Mary Kennedy, Padmini Rangamani, Terrence J. Sejnowski
Interactions between calmodulin and neurogranin govern the dynamics of CaMKII as a leaky integrator. PLoS Comput. Biol. 16 (7) (2020)
Pamela K. Kreeger, Amy Brock, Holly C. Gibbs, K. Jane Grande-Allen, Alice H. Huang, Kristyn S. Masters, Padmini Rangamani, Michaela R. Reagan, Shannon L. Servoss
Ten simple rules for women principal investigators during a pandemic. PLoS Comput. Biol. 16 (10) (2020)