Nitin S. Baliga

Publication Activity (10 Years)

Years Active: 2006-2015
Publications (10 Years): 1

Top Topics

Industrial Strength

Biological Networks

Signaling Pathways

Top Venues

BMC Syst. Biol.

Briefings Bioinform.

Nucleic Acids Res.

PLoS Comput. Biol.

Publications

Samuel A. Danziger, David J. Reiss, Alexander V. Ratushny, Jennifer J. Smith, Christopher L. Plaisier, John D. Aitchison, Nitin S. Baliga
Bicluster Sampled Coherence Metric (BSCM) provides an accurate environmental context for phenotype predictions. BMC Syst. Biol. 9 (S-2) (2015)
Christopher L. Plaisier, Fang-Yin Lo, Justin Ashworth, Aaron N. Brooks, Karlyn D. Beer, Amardeep Kaur, Min Pan, David J. Reiss, Marc T. Facciotti, Nitin S. Baliga
Evolution of context dependent regulation by expansion of feast/famine regulatory proteins. BMC Syst. Biol. 8 (2014)
James Christopher Bare, Nitin S. Baliga
Architecture for interoperable software in biology. Briefings Bioinform. 15 (4) (2014)
Serdar Turkarslan, Elisabeth J. Wurtmann, Wei-Ju Wu, Ning Jiang, J. Christopher Bare, Karen Foley, David J. Reiss, Pavel S. Novichkov, Nitin S. Baliga
Network portal: a database for storage, analysis and visualization of biological networks. Nucleic Acids Res. 42 (Database-Issue) (2014)
Wyming Lee Pang, Amardeep Kaur, Alexander V. Ratushny, Aleksandar Cvetkovic, Sunil Kumar, Min Pan, Adam P. Arkin, John D. Aitchison, Michael W. W. Adams, Nitin S. Baliga
Metallochaperones Regulate Intracellular Copper Levels. PLoS Comput. Biol. 9 (1) (2013)
Christopher Plaisier, J. Christopher Bare, Nitin S. Baliga
miRvestigator: web application to identify miRNAs responsible for co-regulated gene expression patterns discovered through transcriptome profiling. Nucleic Acids Res. 39 (Web-Server-Issue) (2011)
Marc T. Facciotti, Wyming Lee Pang, Fang-Yin Lo, Kenia Whitehead, Tie Koide, Ken-ichi Masumura, Min Pan, Amardeep Kaur, David J. Larsen, David J. Reiss, Linh Hoang, Ewa Kalisiak, Trent Northen, Sunia A. Trauger, Gary Siuzdak, Nitin S. Baliga
Large scale physiological readjustment during growth enables rapid, comprehensive and inexpensive systems analysis. BMC Syst. Biol. 4 (2010)
J. Christopher Bare, Tie Koide, David J. Reiss, Dan Tenenbaum, Nitin S. Baliga
Integration and visualization of systems biology data in context of the genome. BMC Bioinform. 11 (2010)
Dan Tenenbaum, J. Christopher Bare, Nitin S. Baliga
GTC: A web server for integrating systems biology data with web tools and desktop applications. Source Code Biol. Medicine 5 (2010)
David J. Reiss, Marc T. Facciotti, Nitin S. Baliga
Model-based deconvolution of genome-wide DNA binding. Bioinform. 24 (3) (2008)
J. Christopher Bare, Paul T. Shannon, Amy K. Schmid, Nitin S. Baliga
The Firegoose: two-way integration of diverse data from different bioinformatics web resources with desktop applications. BMC Bioinform. 8 (2007)
Paul T. Shannon, David J. Reiss, Richard Bonneau, Nitin S. Baliga
The Gaggle: An open-source software system for integrating bioinformatics software and data sources. BMC Bioinform. 7 (2006)
David J. Reiss, Nitin S. Baliga, Richard Bonneau
Integrated biclustering of heterogeneous genome-wide datasets for the inference of global regulatory networks. BMC Bioinform. 7 (2006)