Meriç Ataman

Publication Activity (10 Years)

Years Active: 2017-2019
Publications (10 Years): 5

Top Topics

Biologically Relevant

Qualitative And Quantitative

Metabolic Networks

Top Venues

PLoS Comput. Biol.

Publications

Benedict Borer, Meriç Ataman, Vassily Hatzimanikatis, Dani Or
Modeling metabolic networks of individual bacterial agents in heterogeneous and dynamic soil habitats (IndiMeSH). PLoS Comput. Biol. 15 (6) (2019)
Pierre Salvy, Georgios Fengos, Meriç Ataman, Thomas Pathier, Keng C. Soh, Vassily Hatzimanikatis
pyTFA and matTFA: a Python package and a Matlab toolbox for Thermodynamics-based Flux Analysis. Bioinform. 35 (1) (2019)
Meriç Ataman, Vassily Hatzimanikatis
lumpGEM: Systematic generation of subnetworks and elementally balanced lumped reactions for the biosynthesis of target metabolites. PLoS Comput. Biol. 13 (7) (2017)
Meriç Ataman, Daniel F. Hernandez Gardiol, Georgios Fengos, Vassily Hatzimanikatis
redGEM: Systematic reduction and analysis of genome-scale metabolic reconstructions for development of consistent core metabolic models. PLoS Comput. Biol. 13 (7) (2017)
Anush Chiappino-Pepe, Stepan Tymoshenko, Meriç Ataman, Dominique Soldati-Favre, Vassily Hatzimanikatis
Bioenergetics-based modeling of Plasmodium falciparum metabolism reveals its essential genes, nutritional requirements, and thermodynamic bottlenecks. PLoS Comput. Biol. 13 (3) (2017)