Matteo T. Degiacomi

Publication Activity (10 Years)

Years Active: 2016-2023
Publications (10 Years): 7

Top Topics

Tandem Mass Spectra

Generative Model

Subcellular Localization

Protein Structure

Top Venues

Comput. Phys. Commun.

J. Chem. Inf. Model.

Publications

Samuel C. Musson, Matteo T. Degiacomi
Molearn: a Python package streamlining the design of generative models of biomolecular dynamics. J. Open Source Softw. 8 (90) (2023)
Lucas S. P. Rudden, Samuel C. Musson, Justin L. P. Benesch, Matteo T. Degiacomi
Biobox: a toolbox for biomolecular modelling. Bioinform. 38 (4) (2022)
Matteo T. Degiacomi, Shansi Tian, H. Chris Greenwell, Valentina Erastova
DynDen: Assessing convergence of molecular dynamics simulations of interfaces. Comput. Phys. Commun. 269 (2021)
Lucas S. P. Rudden, Matteo T. Degiacomi
Transmembrane Protein Docking with JabberDock. J. Chem. Inf. Model. 61 (3) (2021)
Adam Leach, Lucas S. P. Rudden, Sam Bond-Taylor, John C. Brigham, Matteo T. Degiacomi, Chris G. Willcocks
Shape tracing: An extension of sphere tracing for 3D non-convex collision in protein docking. BIBE (2020)
Venkata K. Ramaswamy, Chris G. Willcocks, Matteo T. Degiacomi
Learning protein conformational space by enforcing physics with convolutions and latent interpolations. CoRR (2019)
Matteo T. Degiacomi, Valentina Erastova, Mark R. Wilson
Easy creation of polymeric systems for molecular dynamics with Assemble! Comput. Phys. Commun. 202 (2016)