Marta B. Lopes

Publication Activity (10 Years)

Years Active: 2009-2024
Publications (10 Years): 21

Top Topics

Environmental Data

Colorectal Cancer

Top Venues

Publications

João Brandão, Marta B. Lopes, Eunice Carrasquinha
Refining Gene Selection and Outlier Detection in Glioblastoma Based on a Consensus Approach for Regularized Survival Models. IWBBIO (1) (2024)
Sérgio Tavares, Pedro R. Costa, Ludwig Krippahl, Marta B. Lopes
Satellite-based feature extraction and multivariate time-series prediction of biotoxin contamination in shellfish. CoRR (2023)
Diogo Ribeiro, Filipe Ferraz, Marta B. Lopes, Susana Rodrigues, Pedro R. Costa, Susana Vinga, Alexandra M. Carvalho
Causal Graph Discovery for Explainable Insights on Marine Biotoxin Shellfish Contamination. IDEAL (2023)
Eliana Ibrahimi, Mina Norouzirad, Melisa Meto, Marta B. Lopes
Regularized Generalized Linear Models to Disclose Host-Microbiome Associations in Colorectal Cancer. ICoMS (2023)
Carolina Peixoto, Marta B. Lopes, Marta Martins, Sandra Casimiro, Daniel Sobral, Ana Rita Grosso, Catarina Abreu, Daniela Macedo, Ana Lúcia Costa, Helena Pais, Cecília Alvim, André Mansinho, Pedro Filipe, Pedro Marques da Costa, Afonso Fernandes, Paula Borralho, Cristina Ferreira, João Malaquias, António Quintela, Shannon Kaplan, Mahdi Golkaram, Michael Salmans, Nafeesa Khan, Raakhee Vijayaraghavan, Shile Zhang, Traci Pawlowski, Jim Godsey, Alex So, Li Liu, Luís Costa, Susana Vinga
Identification of biomarkers predictive of metastasis development in early-stage colorectal cancer using network-based regularization. BMC Bioinform. 24 (1) (2023)
Ana Rita Baião, Carolina Peixoto, Marta B. Lopes, Pedro Reis Costa, Alexandra M. Carvalho, Susana Vinga
Evaluating the Causal Role of Environmental Data in Shellfish Biotoxin Contamination on the Portuguese Coast. EPIA (2) (2023)
Roberta Coletti, Marta B. Lopes
Multi-omics Data Integration and Network Inference for Biomarker Discovery in Glioma. EPIA (2) (2023)
Sofia Martins, Roberta Coletti, Marta B. Lopes
Disclosing transcriptomics network-based signatures of glioma heterogeneity using sparse methods. BioData Min. 16 (1) (2023)
Filipe Ferraz, Diogo Ribeiro, Marta B. Lopes, Sónia Pedro, Susana Vinga, Alexandra M. Carvalho
Comparative Analysis of Machine Learning Models for Time-Series Forecasting of Escherichia Coli Contamination in Portuguese Shellfish Production Areas. LOD (1) (2023)
Rafaela C. Cruz, Pedro R. Costa, Ludwig Krippahl, Marta B. Lopes
Forecasting biotoxin contamination in mussels across production areas of the Portuguese coast with Artificial Neural Networks. Knowl. Based Syst. 257 (2022)
Inês Diegues, Susana Vinga, Marta B. Lopes
Identification of Common Gene Signatures in Microarray and RNA-Sequencing Data Using Network-Based Regularization. IWBBIO (2020)
Eunice Carrasquinha, André Veríssimo, Marta B. Lopes, Susana Vinga
Network-Based Variable Selection for Survival Outcomes in Oncological Data. IWBBIO (2020)
Marta B. Lopes, Susana Vinga
Tracking intratumoral heterogeneity in glioblastoma via regularized classification of single-cell RNA-Seq data. BMC Bioinform. 21 (1) (2020)
Marta B. Lopes, André Veríssimo, Eunice Carrasquinha, Susana Vinga
On the Role of Hub and Orphan Genes in the Diagnosis of Breast Invasive Carcinoma. LOD (2019)
Marta B. Lopes, Sandra Casimiro, Susana Vinga
Twiner: correlation-based regularization for identifying common cancer gene signatures. BMC Bioinform. 20 (1) (2019)
Marta B. Lopes, Sandra Casimiro, Susana Vinga
Twiner: correlation-based regularization for identifying common cancer gene signatures. BMC Bioinform. 20 (1) (2019)
André Veríssimo, Marta B. Lopes, Eunice Carrasquinha, Susana Vinga
Random Sample Consensus for the Robust Identification of Outliers in Cancer Data. CIBB (2019)
Eunice Carrasquinha, André Veríssimo, Marta B. Lopes, Susana Vinga
Variable Selection and Outlier Detection in Regularized Survival Models: Application to Melanoma Gene Expression Data. LOD (2018)
Marta B. Lopes, André Veríssimo, Eunice Carrasquinha, Sandra Casimiro, Niko Beerenwinkel, Susana Vinga
Ensemble outlier detection and gene selection in triple-negative breast cancer data. BMC Bioinform. 19 (1) (2018)
Eunice Carrasquinha, André Veríssimo, Marta B. Lopes, Susana Vinga
Identification of influential observations in high-dimensional cancer survival data through the rank product test. BioData Min. 11 (1) (2018)
João Villa-Brito, Marta B. Lopes, Alexandra M. Carvalho, Susana Vinga
Unravelling Breast and Prostate Common Gene Signatures by Bayesian Network Learning. CIBB (2018)
Marta B. Lopes, José M. Bioucas-Dias, Mário A. T. Figueiredo, Jean-Claude Wolff, Nisha Mistry, John Warrack
Comparison of near infrared and Raman hyperspectral unmixing performances for chemical identification of pharmaceutical tablets. WHISPERS (2011)
Marta B. Lopes, José M. Bioucas-Dias, Mário A. T. Figueiredo, Jean-Claude Wolff
Spectral unmixing via minimum volume simplices: Application to near infrared spectra of counterfeit tablets. WHISPERS (2009)