Marcel Kucharík

Publication Activity (10 Years)

Years Active: 2011-2024
Publications (10 Years): 5

Top Topics

Computational Framework

Rna Secondary Structure Prediction

Energy Landscape

Top Venues

J. Integr. Bioinform.

Publications

Jaroslav Budis, Werner Krampl, Marcel Kucharík, Rastislav Hekel, Adrián Goga, Jozef Sitarcík, Michal Lichvár, David Smolak, Miroslav Böhmer, Andrej Baláz, Frantisek Duris, Juraj Gazdarica, Katarina Soltys, Ján Turna, Ján Radvánszky, Tomás Szemes
SnakeLines: integrated set of computational pipelines for sequencing reads. J. Integr. Bioinform. 20 (3) (2024)
Jaroslav Budis, Werner Krampl, Marcel Kucharík, Rastislav Hekel, Adrian Goga, Michal Lichvar, David Smolak, Miroslav Bohmer, Andrej Balaz, Frantisek Duris, Juraj Gazdarica, Katarina Soltys, Jan Turna, Jan Radvanszky, Tomás Szemes
SnakeLines: integrated set of computational pipelines for sequencing reads. CoRR (2021)
Jaroslav Budis, Juraj Gazdarica, Jan Radvanszky, Gábor Szücs, Marcel Kucharík, Lucia Strieskova, Iveta Gazdaricova, Maria Harsanyova, Frantisek Duris, Gabriel Minarik, Martina Sekelska, Bálint Nagy, Jan Turna, Tomás Szemes
Combining count- and length-based z-scores leads to improved predictions in non-invasive prenatal testing. Bioinform. 35 (8) (2019)
Jaroslav Budis, Marcel Kucharík, Frantisek Duris, Juraj Gazdarica, Michaela Zrubcová, Andrej Ficek, Tomás Szemes, Brona Brejová, Jan Radvanszky
Dante: genotyping of known complex and expanded short tandem repeats. Bioinform. 35 (8) (2019)
Marcel Kucharík, Ivo L. Hofacker, Peter F. Stadler, Jing Qin
Pseudoknots in RNA folding landscapes. Bioinform. 32 (2) (2016)
Martin Mann, Marcel Kucharík, Christoph Flamm, Michael T. Wolfinger
Memory-efficient RNA energy landscape exploration. Bioinform. 30 (18) (2014)
Marcel Kucharík, Ivo L. Hofacker, Peter F. Stadler, Jing Qin
Basin Hopping Graph: a computational framework to characterize RNA folding landscapes. Bioinform. 30 (14) (2014)
Marcel Kucharík, Jakub Kovác, Brona Brejová
Gene finding with complex external information. ITAT (2011)