Lopamudra Giri

Publication Activity (10 Years)

Years Active: 2015-2023
Publications (10 Years): 23

Top Topics

Gustafson Kessel

Computational Framework

Top Venues

Publications

Debasmita Saha, Shrirang Hadule, Lopamudra Giri
A deep learning approach for automation in neurite tracing and cell size estimation from differential contrast images under healthy and hypoxic condition. EMBC (2023)
Debasmita Saha, Vaibhav Dhyani, Lopamudra Giri
In vitro laser scanning confocal microscopy and unsupervised segmentation: Quantification of cytosolic calcium and RNA distribution in hypoxic neurons. EMBC (2023)
Dipanjan Sehanobish, Vaibhav Dhyani, Gare Suman, Kishalay Mitra, Lopamudra Giri
Microstate analysis of GABAB and mGluR Mediated Modulation of Calcium Spiking in Hippocampal Neurons. NER (2023)
Vaibhav Dhyani, KV Venkatesh, Lopamudra Giri
Computational Framework for in Silico Analysis of Neural Hyperactivity and Loss of Neural Activity in a Population of Interconnected Neurons. NER (2023)
Gare Suman, Soumita Chel, Priyanka Devi Pantula, Abha Saxena, Kishalay Mitra, Rahuldeb Sarkar, Lopamudra Giri
Analytics Pipeline for Visualization of Single Cell RNA Sequencing Data from Brochoaveolar Fluid in COVID-19 Patients: Assessment of Neuro Fuzzy-C-Means and HDBSCAN. EMBC (2022)
Surbhi Sharma, Abha Saxena, Soumita Chel, Kishalay Mitra, Lopamudra Giri
Mathematical modeling of viral infection dynamics and immune response in SARS-CoV-2: A computational framework for testing drug efficacy. EMBC (2021)
Sathish Ande, Srinivas Avasarala, Ajith Karunarathne, Lopamudra Giri, Soumya Jana
Statistical Dependence between Neuronal Spike Train Pairs: Quantification based on Empirical Mutual Information Rate. BHI (2021)
Sathish Ande, Jayanth R. Regatti, Neha Pandey, Ajith Karunarathne, Lopamudra Giri, Soumya Jana
Heterogeneity in Neuronal Calcium Spike Trains based on Empirical Distance. NER (2021)
Vaibhav Dhyani, Soumya Jana, Lopamudra Giri
Gaussian Mixture Modeling of Single-Neuron Responses Obtained from Confocal-Calcium-Imaging of Dissociated Rat Hippocampal Neurons. NER (2021)
Abha Saxena, Vaibhav Dhyani, Soumya Jana, Lopamudra Giri
+ response in hippocampal neurons at different drug dose. NCC (2020)
Soumita Chel, Gare Suman, Lopamudra Giri
Detection of Specific Templates in Calcium Spiking in HeLa Cells Using Hierarchical DBSCAN: Clustering and Visualization of CellDrug Interaction at Multiple Doses. EMBC (2020)
Gare Suman, Abha Saxena, Lopamudra Giri
Confocal Imaging of Intercellular Calcium in HeLa Cells for Monitoring Drug-Response: Biophysical Framework for Visualization of the Time-Lapse Images. ISBI (2020)
Priyanka Devi Pantula, Srinivas Soumitri Miriyala, Lopamudra Giri, Kishalay Mitra
Synchronicity Identification in Hippocampal Neurons using Artificial Neural Network assisted Fuzzy C-means Clustering. SSCI (2020)
Vikas Upadhyay, Ravutla Surya Teja, Vaibhav Dhyani, Kevin George, Sarpras Swain, Kishalay Mitra, Lopamudra Giri
oscillations in hippocampal neurons using differential evolution. NER (2019)
Ranjana Singh, Abha Saxena, Lopamudra Giri
Single Neuron Imaging Reveals Metabotropic Glutamate Receptor-Mediated Bursting and Delay in Calcium Oscillation in Hippocampal Neurons. EMBC (2019)
Abha Saxena, Vikas Upadhyay, Vaibhav Dhyani, Soumya Jana, Lopamudra Giri
Cell-to-Cell Variability in Protein Expression during Viral Infection: Monte-Carlo Simulation and Validation based on Confocal Imaging. EMBC (2019)
Divya Spoorthy, Shanmukh Reddy Manne, Vaibhav Dhyani, Sarpras Swain, Shahna Shahulhameed, Siddhartha Mishra, Inderjeet Kaur, Lopamudra Giri, Soumya Jana
Automatic Identification of Mixed Retinal Cells in Time-Lapse Fluorescent Microscopy Images using High-Dimensional DBSCAN. EMBC (2019)
Abha Saxena, Vaibhav Dhyani, Gare Suman, Lopamudra Giri
response in hippocampal neurons. EMBC (2019)
Sarpras Swain, Priyanka Devi Pantula, Kishalay Mitra, Lopamudra Giri
and fuzzy clustering reveal the circuit topology details underlying synchronization in hippocampal neurons. EMBC (2018)
Srinivas Soumitri Miriyala, Priyanka Devi Pantula, Lopamudra Giri, Kishalay Mitra
Smart Data Analytics approach to model Complex Biochemical Oscillations in Hippocampal Neurons. EMBC (2018)
Sarpras Swain, Sathish Ande, Ravutla Suryateja, Soumya Jana, Lopamudra Giri
Spatially resolved calcium spiking in hippocampal neurons: Estimation via confocal imaging and model-based simulation. NER (2017)
Jophin G. Joseph, Sailaja Nanda, Sheetal Vennamalla, Govardhan Bhure, Ranjana Singh, Soumya Jana, Lopamudra Giri
Integrated quantification based on confocal imaging: Cell crowding modulates heterogeneity in GPCR-mediated calcium oscillation. EMBC (2016)
Puneeth Reddy, Saurabh Shukla, Ajith Karunarathne, Soumya Jana, Lopamudra Giri
Segmentation of neuron and measurement of optically programed neurite growth: Fast automation via Bayesian thresholding. NER (2015)