Lila Kari

Publication Activity (10 Years)

Years Active: 1992-2024
Publications (10 Years): 67

Top Venues

Theor. Comput. Sci.

CoRR

Nat. Comput.

J. Autom. Lang. Comb.

Publications

Fatemeh Alipour, Kathleen A. Hill, Lila Kari
CGRclust: Chaos Game Representation for Twin Contrastive Clustering of Unlabelled DNA Sequences. CoRR (2024)
Zahra Gharaee, Scott C. Lowe, ZeMing Gong, Pablo Millan Arias, Nicholas Pellegrino, Austin T. Wang, Joakim Bruslund Haurum, Iuliia Zarubiieva, Lila Kari, Dirk Steinke, Graham W. Taylor, Paul W. Fieguth, Angel X. Chang
BIOSCAN-5M: A Multimodal Dataset for Insect Biodiversity. CoRR (2024)
Lila Kari
Editorial. Theor. Comput. Sci. 940 (Part) (2023)
Pablo Millan Arias, Niousha Sadjadi, Monireh Safari, ZeMing Gong, Austin T. Wang, Scott C. Lowe, Joakim Bruslund Haurum, Iuliia Zarubiieva, Dirk Steinke, Lila Kari, Angel X. Chang, Graham W. Taylor
BarcodeBERT: Transformers for Biodiversity Analysis. CoRR (2023)
Pablo Millan Arias, Kathleen A. Hill, Lila Kari
DeLUCS: a deep learning interactive tool for alignment-free clustering of DNA sequences. Bioinform. 39 (9) (2023)
Lila Kari
Editorial. Theor. Comput. Sci. 920 (2022)
Lila Kari, Kalpana Mahalingam, Palak Pandoh, Zihao Wang
Primitivity of Atom Watson-Crick Fibonacci Words. J. Autom. Lang. Comb. 27 (1-3) (2022)
Lila Kari, Kalpana Mahalingam
Watson-Crick Powers of a Word. CAI (2022)
Lila Kari
Editorial. Theor. Comput. Sci. 908 (2022)
Lila Kari
Editorial. Theor. Comput. Sci. 926 (2022)
Lila Kari
Editorial. Theor. Comput. Sci. 924 (2022)
Lila Kari
Editorial. Theor. Comput. Sci. 851 (2021)
Lila Kari
Editorial. Theor. Comput. Sci. 893 (2021)
Lila Kari
Editorial. Theor. Comput. Sci. 872 (2021)
Lila Kari, Timothy Ng
Descriptional Complexity of Semi-Simple Splicing Systems. Int. J. Found. Comput. Sci. 32 (6) (2021)
Francesco Bellamoli, Giuditta Franco, Lila Kari, Silvia Lampis, Timothy Ng, Zihao Wang
Conjugate word blending: formal model and experimental implementation by XPCR. Nat. Comput. 20 (4) (2021)
Lila Kari
Editorial. Theor. Comput. Sci. 875 (2021)
Lila Kari, Ion Petre, Grzegorz Rozenberg, Arto Salomaa
A fascinating rainbow of computation - Honoring Gheorghe Păun on the occasion of his 70th birthday. Theor. Comput. Sci. 862 (2021)
Lila Kari
Editorial. Theor. Comput. Sci. 894 (2021)
Paola Bonizzoni, Lila Kari, Ion Petre, Grzegorz Rozenberg
Building bridges - Honoring Nataša Jonoska on the occasion of her 60th birthday. Theor. Comput. Sci. 894 (2021)
Lila Kari
Editorial. Theor. Comput. Sci. 870 (2021)
Lila Kari, Manasi S. Kulkarni, Kalpana Mahalingam, Zihao Wang
Involutive Fibonacci Words. J. Autom. Lang. Comb. 26 (3-4) (2021)
Lila Kari
Editorial. Theor. Comput. Sci. 881 (2021)
Lila Kari
Editorial. Theor. Comput. Sci. 862 (2021)
Srujan Kumar Enaganti, Lila Kari, Timothy Ng, Zihao Wang
Word Blending in Formal Languages. Fundam. Informaticae 171 (1-4) (2020)
Lila Kari
Editorial. Theor. Comput. Sci. 805 (2020)
Lila Kari, Timothy Ng
Descriptional Complexity of Semi-simple Splicing Systems. DLT (2020)
Lila Kari
Editorial. Theor. Comput. Sci. 817 (2020)
Lila Kari
Editorial. Theor. Comput. Sci. 832 (2020)
Lila Kari
Editorial. Theor. Comput. Sci. 816 (2020)
Giorgio Ausiello, Lila Kari, Grzegorz Rozenberg, Donald Sannella, Paul G. Spirakis, Pierre-Louis Curien
Preface. Theor. Comput. Sci. 807 (2020)
Lila Kari
Editorial. Theor. Comput. Sci. 843 (2020)
Janusz A. Brzozowski, Lila Kari, Bai Li, Marek Szykula
State Complexity of Overlap Assembly. Int. J. Found. Comput. Sci. 31 (8) (2020)
Lila Kari
Editorial. Theor. Comput. Sci. 801 (2020)
Gurjit S. Randhawa, Kathleen A. Hill, Lila Kari
MLDSP-GUI: an alignment-free standalone tool with an interactive graphical user interface for DNA sequence comparison and analysis. Bioinform. 36 (7) (2020)
Lila Kari, Timothy Ng
Descriptional Complexity of Semi-Simple Splicing Systems. CoRR (2019)
Lila Kari
Editorial. Theor. Comput. Sci. 785 (2019)
Lila Kari, Amirhossein Simjour
Simplifying the role of signals in tile self-assembly. Nat. Comput. 18 (2) (2019)
Lila Kari
Editorial. Theor. Comput. Sci. 765 (2019)
Lila Kari, Timothy Ng
State Complexity of Simple Splicing. DCFS (2019)
Giorgio Ausiello, Lila Kari, Grzegorz Rozenberg, Donald Sannella, Paul G. Spirakis, Pierre-Louis Curien
Preface. Theor. Comput. Sci. 777 (2019)
Lila Kari, Timothy Ng
State Complexity of Pseudocatenation. LATA (2019)
Lila Kari
Editorial. Theor. Comput. Sci. 752 (2018)
Lila Kari
Editorial. Theor. Comput. Sci. 736 (2018)
Srujan Kumar Enaganti, Lila Kari, Timothy Ng, Zihao Wang
Word Blending in Formal Languages: The Brangelina Effect. UCNC (2018)
Lila Kari, Stavros Konstantinidis, Steffen Kopecki, Meng Yang
Efficient Algorithms for Computing the Inner Edit Distance of a Regular Language via Transducers. Algorithms 11 (11) (2018)
Lila Kari, Stavros Konstantinidis, Steffen Kopecki
Transducer descriptions of DNA code properties and undecidability of antimorphic problems. Inf. Comput. 259 (2) (2018)
Lila Kari
Editorial. Theor. Comput. Sci. 724 (2018)
Lila Kari, Manasi S. Kulkarni, Kalpana Mahalingam
Relative Watson-Crick Primitivity of Words. J. Autom. Lang. Comb. 23 (1-3) (2018)
Janusz A. Brzozowski, Lila Kari, Bai Li, Marek Szykula
State Complexity of Overlap Assembly. CIAA (2018)
Lila Kari, Manasi S. Kulkarni
Disjunctivity and other properties of sets of pseudo-bordered words. Acta Informatica 54 (4) (2017)
Janusz A. Brzozowski, Lila Kari, Bai Li, Marek Szykula
State Complexity of Overlap Assembly. CoRR (2017)
Lila Kari, Steffen Kopecki, Pierre-Étienne Meunier, Matthew J. Patitz, Shinnosuke Seki
Binary Pattern Tile Set Synthesis Is NP-Hard. Algorithmica 78 (1) (2017)
Lila Kari
Editorial. Theor. Comput. Sci. 701 (2017)
Lila Kari
Editorial. Theor. Comput. Sci. 671 (2017)
Lila Kari, Steffen Kopecki
Deciding whether a regular language is generated by a splicing system. J. Comput. Syst. Sci. 84 (2017)
Lila Kari, Amirhossein Simjour
Smart Tile Self-Assembly and Replication. Fundam. Informaticae 154 (1-4) (2017)
Rallis Karamichalis, Lila Kari
MoDMaps3D: an interactive webtool for the quantification and 3D visualization of interrelationships in a dataset of DNA sequences. Bioinform. 33 (19) (2017)
Lila Kari
Editorial. Theor. Comput. Sci. 682 (2017)
Srujan Kumar Enaganti, Oscar H. Ibarra, Lila Kari, Steffen Kopecki
On the overlap assembly of strings and languages. Nat. Comput. 16 (1) (2017)
Srujan Kumar Enaganti, Oscar H. Ibarra, Lila Kari, Steffen Kopecki
Further remarks on DNA overlap assembly. Inf. Comput. 253 (2017)
Lila Kari
Editorial. Theor. Comput. Sci. 641 (2016)
Lila Kari
Editorial. Theor. Comput. Sci. 633 (2016)
Rallis Karamichalis, Lila Kari, Stavros Konstantinidis, Steffen Kopecki, Stephen Solis-Reyes
Additive methods for genomic signatures. BMC Bioinform. 17 (2016)
Lila Kari
Editorial. Theor. Comput. Sci. 632 (2016)
Lila Kari
Editorial. Theor. Comput. Sci. 623 (2016)
Oscar H. Ibarra, Lila Kari, Steffen Kopecki
Preface. Nat. Comput. 15 (1) (2016)
Lila Kari, Stavros Konstantinidis, Steffen Kopecki
Transducer Descriptions of DNA Code Properties and Undecidability of Antimorphic Problems. CoRR (2015)
Srujan Kumar Enaganti, Lila Kari, Steffen Kopecki
A Formal Language Model of DNA Polymerase Enzymatic Activity. Fundam. Informaticae 138 (1-2) (2015)
Lila Kari, Steffen Kopecki, Shinnosuke Seki
3-color bounded patterned self-assembly. Nat. Comput. 14 (2) (2015)
Lila Kari
Editorial. Theor. Comput. Sci. 608 (2015)
Giorgio Ausiello, Lila Kari, Grzegorz Rozenberg, Donald Sannella
TCS in the 21st century. Theor. Comput. Sci. 591 (2015)
Lila Kari
Editorial. Theor. Comput. Sci. 598 (2015)
Lila Kari, Stavros Konstantinidis, Steffen Kopecki
Transducer Descriptions of DNA Code Properties and Undecidability of Antimorphic Problems. DCFS (2015)
Rallis Karamichalis, Lila Kari, Stavros Konstantinidis, Steffen Kopecki
An investigation into inter- and intragenomic variations of graphic genomic signatures. BMC Bioinform. 16 (2015)
Lila Kari
Editorial. Theor. Comput. Sci. 599 (2015)
Helmut Jürgensen, Lila Kari, Steffen Kopecki
Methods for Relativizing Properties of Codes. Acta Cybern. 22 (2) (2015)
Lila Kari, Steffen Kopecki, Pierre-Étienne Meunier, Matthew J. Patitz, Shinnosuke Seki
Binary Pattern Tile Set Synthesis Is NP-hard. ICALP (1) (2015)
Lila Kari, Manasi S. Kulkarni
Pseudo-Identities and Bordered Words. Discrete Mathematics and Computer Science (2014)
Lila Kari, Steffen Kopecki, Pierre-Étienne Meunier, Matthew J. Patitz, Shinnosuke Seki
Binary pattern tile set synthesis is NP-hard. CoRR (2014)
Lila Kari, Steffen Kopecki, Amirhossein Simjour
Hypergraph Automata: a Theoretical Model for patterned Self-assembly. Int. J. Found. Comput. Sci. 25 (4) (2014)
Lila Kari, Stavros Konstantinidis, Steffen Kopecki, Meng Yang
An efficient algorithm for computing the edit distance of a regular language via input-altering transducers. CoRR (2014)
Lila Kari, Stavros Konstantinidis, Steffen Kopecki
On the maximality of languages with combined types of code properties. Theor. Comput. Sci. 550 (2014)
Lila Kari, Manasi S. Kulkarni
Generating the Pseudo-Powers of a Word. J. Autom. Lang. Comb. 19 (1-4) (2014)
Lila Kari
Negative Glues and Non-determinism in Nanocomputations by Self-assembly. CiE (2013)
Lila Kari, Steffen Kopecki, Shinnosuke Seki
3-color Bounded Patterned Self-assembly. CoRR (2013)
Nathaniel Bryans, Ehsan Chiniforooshan, David Doty, Lila Kari, Shinnosuke Seki
The Power of Nondeterminism in Self-Assembly. Theory Comput. 9 (2013)
Lila Kari, Steffen Kopecki, Amirhossein Simjour
Hypergraph Automata: A Theoretical Model for Patterned Self-assembly CoRR (2013)
David Doty, Lila Kari, Benoît Masson
Negative Interactions in Irreversible Self-assembly. Algorithmica 66 (1) (2013)
Yuan Gao, Lila Kari
State complexity of star of union and square of union on k regular languages. Theor. Comput. Sci. 499 (2013)
Lila Kari, Kathleen A. Hill, Abu Sadat Sayem, Nathaniel Bryans, Katelyn Davis, Nikesh S. Dattani
Map of Life: Measuring and Visualizing Species' Relatedness with "Molecular Distance Maps". CoRR (2013)
Lila Kari, Steffen Kopecki, Shinnosuke Seki
3-Color Bounded Patterned Self-assembly - (Extended Abstract). DNA (2013)
Lila Kari, Steffen Kopecki, Amirhossein Simjour
Hypergraph Automata: A Theoretical Model for Patterned Self-assembly. UCNC (2013)
Ehsan Chiniforooshan, Lila Kari, Zhi Xu
Pseudopower Avoidance. Fundam. Informaticae 114 (1) (2012)
Yuan Gao, Lila Kari, Sheng Yu
State complexity of union and intersection of star on k regular languages. Theor. Comput. Sci. 429 (2012)
Ehsan Chiniforooshan, Mark Daley, Oscar H. Ibarra, Lila Kari, Shinnosuke Seki
One-reversal counter machines and multihead automata: Revisited. Theor. Comput. Sci. 454 (2012)
Lila Kari, Steffen Kopecki
Deciding Whether a Regular Language Is Generated by a Splicing System. DNA (2012)
Lila Kari, Zhi Xu
De Bruijn Sequences Revisited. Int. J. Found. Comput. Sci. 23 (6) (2012)
Lila Kari, Shinnosuke Seki, Zhi Xu
Triangular and Hexagonal Tile Self-assembly Systems. Computation, Physics and Beyond (2012)
Yuan Gao, Lila Kari
State Complexity of Star and Square of Union of k Regular Languages. DCFS (2012)

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Publication Activity (10 Years)

Top Topics

Top Venues

Lila Kari