Junru Jin

Publication Activity (10 Years)

Years Active: 2021-2024
Publications (10 Years): 14

Top Topics

Sequence Prediction

Incremental Learning

Top Venues

Comput. Biol. Medicine

Briefings Bioinform.

Publications

Xuetong Yang, Junru Jin, Ruheng Wang, Zhongshen Li, Yu Wang, Leyi Wei
CACPP: A Contrastive Learning-Based Siamese Network to Identify Anticancer Peptides Based on Sequence Only. J. Chem. Inf. Model. 64 (7) (2024)
Ding Wang, Junru Jin, Zhongshen Li, Yu Wang, Mushuang Fan, Sirui Liang, Ran Su, Leyi Wei
StructuralDPPIV: a novel deep learning model based on atom structure for predicting dipeptidyl peptidase-IV inhibitory peptides. Bioinform. 40 (2) (2024)
Jianbo Qiao, Junru Jin, Haoqing Yu, Leyi Wei
Towards retraining-free RNA modification prediction with incremental learning. Inf. Sci. 660 (2024)
Sirui Liang, Yanxi Zhao, Junru Jin, Jianbo Qiao, Ding Wang, Yu Wang, Leyi Wei
Rm-LR: A long-range-based deep learning model for predicting multiple types of RNA modifications. Comput. Biol. Medicine 164 (2023)
Zhongshen Li, Junru Jin, Wentao Long, Leyi Wei
PLPMpro: Enhancing promoter sequence prediction with prompt-learning based pre-trained language model. Comput. Biol. Medicine 164 (2023)
Yu Wang, Jingjie Zhang, Junru Jin, Leyi Wei
MolCAP: Molecular Chemical reActivity Pretraining and prompted-finetuning enhanced molecular representation learning. Comput. Biol. Medicine 167 (2023)
Xin Zhang, Lesong Wei, Xiucai Ye, Kai Zhang, Saisai Teng, Zhongshen Li, Junru Jin, Min Jae Kim, Tetsuya Sakurai, Lizhen Cui, Balachandran Manavalan, Leyi Wei
SiameseCPP: a sequence-based Siamese network to predict cell-penetrating peptides by contrastive learning. Briefings Bioinform. 24 (1) (2023)
Zhongshen Li, Junru Jin, Yu Wang, Wentao Long, Yuanhao Ding, Haiyan Hu, Leyi Wei
ExamPle: explainable deep learning framework for the prediction of plant small secreted peptides. Bioinform. 39 (3) (2023)
Yu Wang, Jingjie Zhang, Junru Jin, Leyi Wei
MolCAP: Molecular Chemical reActivity pretraining and prompted-finetuning enhanced molecular representation learning. CoRR (2023)
Jiayue Hu, Yu Wang, Chao Pang, Junru Jin, Nhat Truong Pham, Balachandran Manavalan, Leyi Wei
DrugormerDTI: Drug Graphormer for drug-target interaction prediction. Comput. Biol. Medicine 161 (2023)
Ruheng Wang, Junru Jin, Quan Zou, Kenta Nakai, Leyi Wei
Predicting protein-peptide binding residues via interpretable deep learning. Bioinform. 38 (13) (2022)
Wenjia He, Yi Jiang, Junru Jin, Zhongshen Li, Jiaojiao Zhao, Balachandran Manavalan, Ran Su, Xin Gao, Leyi Wei
Accelerating bioactive peptide discovery via mutual information-based meta-learning. Briefings Bioinform. 23 (1) (2022)
Yu Wang, Chao Pang, Yuzhe Wang, Yi Jiang, Junru Jin, Sirui Liang, Quan Zou, Leyi Wei
MechRetro is a chemical-mechanism-driven graph learning framework for interpretable retrosynthesis prediction and pathway planning. CoRR (2022)
Yingying Yu, Wenjia He, Junru Jin, Guobao Xiao, Lizhen Cui, Rao Zeng, Leyi Wei
iDNA-ABT: advanced deep learning model for detecting DNA methylation with adaptive features and transductive information maximization. Bioinform. 37 (24) (2021)