Joseph F. Ryan

Publication Activity (10 Years)

Years Active: 1999-2020
Publications (10 Years): 3

Top Topics

Physiological Parameters

Transcriptional Regulation

Plan Generation

Data Visualization

Top Venues

Database J. Biol. Databases Curation

Nucleic Acids Res.

Publications

R. Travis Moreland, Anh-Dao Nguyen, Joseph F. Ryan, Andreas D. Baxevanis
The Mnemiopsis Genome Project Portal: integrating new gene expression resources and improving data visualization. Database J. Biol. Databases Curation 2020 (2020)
Justine Dardaillon, Delphine Dauga, Paul Simion, Emmanuel Faure, Takeshi A. Onuma, Melissa B. DeBiasse, Alexandra Louis, Kazuhiro R. Nitta, Magali Naville, Lydia Besnardeau, Wendy Reeves, Kai Wang, Marie Fagotto, Marion Guéroult-Bellone, Shigeki Fujiwara, Rémi Dumollard, Michael Veeman, Jean-Nicolas Volff, Hugues Roest Crollius, Emmanuel J. P. Douzery, Joseph F. Ryan, Bradley Davidson, Hiroki Nishida, Christelle Dantec, Patrick Lemaire
ANISEED 2019: 4D exploration of genetic data for an extended range of tunicates. Nucleic Acids Res. 48 (Database-Issue) (2020)
Michal Levin, Leon Anavy, Alison G. Cole, Eitan Winter, Natalia Mostov, Sally Khair, Naftalie Senderovich, Ekaterina Kovalev, David H. Silver, Martin Feder, Selene L. Fernandez-Valverde, Nagayasu Nakanishi, David Simmons, Oleg Simakov, Tomas Larsson, Shang-Yun Liu, Ayelet Jerafi-Vider, Karina Yaniv, Joseph F. Ryan, Mark Q. Martindale, Jochen C. Rink, Detlev Arendt, Sandie M. Degnan, Bernard M. Degnan, Tamar Hashimshony, Itai Yanai
The mid-developmental transition and the evolution of animal body plans. Nat. 531 (7596) (2016)
R. Travis Moreland, Joseph F. Ryan, Christopher Pan, Andreas D. Baxevanis
The Homeodomain Resource: a comprehensive collection of sequence, structure, interaction, genomic and functional information on the homeodomain protein family. Database J. Biol. Databases Curation 2009 (2009)
James C. Sullivan, Joseph F. Ryan, James A. Watson, Jeramy Webb, James C. Mullikin, Daniel Rokhsar, John R. Finnerty
Genomics Database. Nucleic Acids Res. 34 (Database-Issue) (2006)
Joseph F. Ryan, John R. Finnerty
CnidBase: The Cnidarian Evolutionary Genomics Database. Nucleic Acids Res. 31 (1) (2003)
Izabela Makalowska, Joseph F. Ryan, Andreas D. Baxevanis
GeneMachine: gene prediction and sequence annotation. Bioinform. 17 (9) (2001)
Sharmila Banerjee-Basu, Joseph F. Ryan, Andreas D. Baxevanis
The Homeodomain Resource: a prototype database for a large protein family. Nucleic Acids Res. 28 (1) (2000)
Sharmila Banerjee-Basu, Erik S. Ferlanti, Joseph F. Ryan, Andreas D. Baxevanis
The Homeodomain Resource: sequences, structures and genomic information. Nucleic Acids Res. 27 (1) (1999)
Prakash S. Ferlanti, Joseph F. Ryan, Izabela Makalowska, Andreas D. Baxevanis
WebBLAST 2.0: an integrated solution for organizing and analyzing sequence data. Bioinform. 15 (5) (1999)