Jonathan Weare

Publication Activity (10 Years)

Years Active: 1998-2024
Publications (10 Years): 22

Top Topics

Spectral Estimation

Variance Reduction

Active Learning

Temporal Difference Learning

Top Venues

SIAM/ASA J. Uncertain. Quantification

SIAM J. Math. Data Sci.

Publications

Atsushi Shimizu, Xiaoou Cheng, Christopher Musco, Jonathan Weare
Improved Active Learning via Dependent Leverage Score Sampling. ICLR (2024)
Xiaoou Cheng, Jonathan Weare
The surprising efficiency of temporal difference learning for rare event prediction. CoRR (2024)
Atsushi Shimizu, Xiaoou Cheng, Christopher Musco, Jonathan Weare
Improved Active Learning via Dependent Leverage Score Sampling. CoRR (2023)
John Strahan, Justin Finkel, Aaron R. Dinner, Jonathan Weare
Predicting rare events using neural networks and short-trajectory data. J. Comput. Phys. 488 (2023)
Jonathan Weare, Robert J. Webber
Randomly sparsified Richardson iteration is really fast. CoRR (2023)
Michael Holst, Houdong Hu, Jianfeng Lu, Jeremy Louis Marzuola, Duo Song, Jonathan Weare
Symmetry Breaking and the Generation of Spin Ordered Magnetic States in Density Functional Theory Due to Dirac Exchange for a Hydrogen Molecule. J. Nonlinear Sci. 32 (6) (2022)
Michael Lindsey, Jonathan Weare, Anna Zhang
Ensemble Markov Chain Monte Carlo with Teleporting Walkers. SIAM/ASA J. Uncertain. Quantification 10 (3) (2022)
Huan Zhang, Robert J. Webber, Michael Lindsey, Timothy C. Berkelbach, Jonathan Weare
Understanding and eliminating spurious modes in variational Monte Carlo using collective variables. CoRR (2022)
Samuel M. Greene, Robert J. Webber, Timothy C. Berkelbach, Jonathan Weare
Approximating Matrix Eigenvalues by Subspace Iteration with Repeated Random Sparsification. SIAM J. Sci. Comput. 44 (5) (2022)
Jacob Roth, David A. Barajas-Solano, Panos Stinis, Jonathan Weare, Mihai Anitescu
A Kinetic Monte Carlo Approach for Simulating Cascading Transmission Line Failure. Multiscale Model. Simul. 19 (1) (2021)
Zachary M. Boyd, Nicolas Fraiman, Jeremy Louis Marzuola, Peter J. Mucha, Braxton Osting, Jonathan Weare
A Metric on Directed Graphs and Markov Chains Based on Hitting Probabilities. SIAM J. Math. Data Sci. 3 (2) (2021)
Michael Lindsey, Jonathan Weare, Anna Zhang
Ensemble Markov chain Monte Carlo with teleporting walkers. CoRR (2021)
Samuel M. Greene, Robert J. Webber, Timothy C. Berkelbach, Jonathan Weare
Approximating matrix eigenvalues by randomized subspace iteration. CoRR (2021)
Robert J. Webber, Erik H. Thiede, Douglas Dow, Aaron R. Dinner, Jonathan Weare
Error Bounds for Dynamical Spectral Estimation. SIAM J. Math. Data Sci. 3 (1) (2021)
Robert J. Webber, Erik H. Thiede, Douglas Dow, Aaron R. Dinner, Jonathan Weare
Error bounds for dynamical spectral estimation. CoRR (2020)
Zachary M. Boyd, Nicolas Fraiman, Jeremy Louis Marzuola, Peter J. Mucha, Braxton Osting, Jonathan Weare
A metric on directed graphs and Markov chains based on hitting probabilities. CoRR (2020)
Aaron R. Dinner, Erik H. Thiede, Brian Van Koten, Jonathan Weare
Stratification as a General Variance Reduction Method for Markov Chain Monte Carlo. SIAM/ASA J. Uncertain. Quantification 8 (3) (2020)
Jacob Roth, David A. Barajas-Solano, Panagiotis Stinis, Jonathan Weare, Mihai Anitescu
A Kinetic Monte Carlo Approach for Simulating Cascading Transmission Line Failure. CoRR (2019)
Aaron R. Dinner, Jonathan C. Mattingly, Jeremy O. B. Tempkin, Brian Van Koten, Jonathan Weare
Trajectory Stratification of Stochastic Dynamics. SIAM Rev. 60 (4) (2018)
Benedict J. Leimkuhler, Charles Matthews, Jonathan Weare
Ensemble preconditioning for Markov chain Monte Carlo simulation. Stat. Comput. 28 (2) (2018)
Lek-Heng Lim, Jonathan Weare
Fast Randomized Iteration: Diffusion Monte Carlo through the Lens of Numerical Linear Algebra. SIAM Rev. 59 (3) (2017)
Erik H. Thiede, Brian Van Koten, Jonathan Weare
Sharp Entrywise Perturbation Bounds for Markov Chains. SIAM J. Matrix Anal. Appl. 36 (3) (2015)
Jonathan Weare
Particle filtering with path sampling and an application to a bimodal ocean current model. J. Comput. Phys. 228 (12) (2009)
Dror Givon, Panagiotis Stinis, Jonathan Weare
Variance Reduction for Particle Filters of Systems With Time Scale Separation. IEEE Trans. Signal Process. 57 (2) (2009)
Florence Horn, Jonathan Weare, Margot W. Beukers, S. Hörsch, Amos Bairoch, W. Chen, Øyvind Edvardsen, Fabien Campagne, Gert Vriend
GPCRDB: an information system for G protein-coupled receptors. Nucleic Acids Res. 26 (1) (1998)