Jonathan S. Mason

Publication Activity (10 Years)

Years Active: 1996-2020
Publications (10 Years): 4

Top Topics

Test Case Selection

Protein Sequences

Posterior Distribution

Top Venues

J. Chem. Inf. Model.

Publications

Francesca Deflorian, Laura Pérez-Benito, Eelke B. Lenselink, Miles Congreve, Herman W. T. van Vlijmen, Jonathan S. Mason, Chris de Graaf, Gary Tresadern
Accurate Prediction of GPCR Ligand Binding Affinity with Free Energy Perturbation. J. Chem. Inf. Model. 60 (11) (2020)
Giulio Mattedi, Francesca Deflorian, Jonathan S. Mason, Chris de Graaf, Francesco L. Gervasio
Understanding Ligand Binding Selectivity in a Prototypical GPCR Family. J. Chem. Inf. Model. 59 (6) (2019)
Dahlia R. Weiss, Andrea Bortolato, Benjamin G. Tehan, Jonathan S. Mason
GPCR-Bench: A Benchmarking Set and Practitioners' Guide for G Protein-Coupled Receptor Docking. J. Chem. Inf. Model. 56 (4) (2016)
Andrea Bortolato, Francesca Deflorian, Dahlia R. Weiss, Jonathan S. Mason
R as a Test Case. J. Chem. Inf. Model. 55 (9) (2015)
Andrea Bortolato, Benjamin G. Tehan, Michael S. Bodnarchuk, Jonathan W. Essex, Jonathan S. Mason
Antagonists as a Case Study. J. Chem. Inf. Model. 53 (7) (2013)
Simone Sciabola, Robert V. Stanton, James E. J. Mills, Maria M. Flocco, Massimo Baroni, Gabriele Cruciani, Francesca Perruccio, Jonathan S. Mason
High-Throughput Virtual Screening of Proteins Using GRID Molecular Interaction Fields. J. Chem. Inf. Model. 50 (1) (2010)
Massimo Baroni, Gabriele Cruciani, Simone Sciabola, Francesca Perruccio, Jonathan S. Mason
A Common Reference Framework for Analyzing/Comparing Proteins and Ligands. Fingerprints for Ligands And Proteins (FLAP): Theory and Application. J. Chem. Inf. Model. 47 (2) (2007)
Siew K. Yeap, Rosalind J. Walley, Michael Snarey, Willem P. van Hoorn, Jonathan S. Mason
Designing Compound Subsets: Comparison of Random and Rational Approaches Using Statistical Simulation. J. Chem. Inf. Model. 47 (6) (2007)
Andrew C. Good, Sung-Jin Cho, Jonathan S. Mason
Descriptors you can count on? Normalized and filtered pharmacophore descriptors for virtual screening. J. Comput. Aided Mol. Des. 18 (7) (2004)
Jonathan S. Mason, Daniel L. Cheney
Ligand-Receptor 3-D Similarity Studies Using Multiple 4-Point Pharmacophores. Pacific Symposium on Biocomputing (1999)
Paul R. Menard, Richard A. Lewis, Jonathan S. Mason
Rational Screening Set Design and Compound Selection: Cascaded Clustering. J. Chem. Inf. Comput. Sci. 38 (3) (1998)
Paul R. Menard, Jonathan S. Mason, Isabelle Morize, Susanne Bauerschmidt
Chemistry Space Metrics in Diversity Analysis, Library Design, and Compound Selection. J. Chem. Inf. Comput. Sci. 38 (6) (1998)
Richard A. Lewis, Jonathan S. Mason, Iain M. McLay
Similarity Measures for Rational Set Selection and Analysis of Combinatorial Libraries: The Diverse Property-Derived (DPD) Approach. J. Chem. Inf. Comput. Sci. 37 (3) (1997)
Stephen D. Pickett, Jonathan S. Mason, Iain M. McLay
Diversity Profiling and Design Using 3D Pharmacophores: Pharmacophore-Derived Queries (PDQ). J. Chem. Inf. Comput. Sci. 36 (6) (1996)