John E. Karro

Publication Activity (10 Years)

Years Active: 2006-2016
Publications (10 Years): 1

Top Topics

Detection Scheme

Motif Discovery

School Children

Top Venues

Publications

Carly E. Schaeffer, Nathaniel D. Figueroa, Xiaolin Liu, John E. Karro
phRAIDER: Pattern-Hunter based Rapid Ab Initio Detection of Elementary Repeats. Bioinform. 32 (12) (2016)
Sutharzan Sreeskandarajan, Michelle M. Flowers, John E. Karro, Chun Liang
A MATLAB-based tool for accurate detection of perfect overlapping and nested inverted repeats in DNA sequences. Bioinform. 30 (6) (2014)
Nathaniel D. Figueroa, Xiaolin Liu, Jiajun Wang, John E. Karro
RAIDER: Rapid Ab Initio Detection of Elementary Repeats. BSB (2013)
Yuan Zhang, Dhananjai Madhava Rao, Mufit Ozden, Jens Mueller, Praveen Raj Kumar, Chun Liang, John E. Karro
Poster: De novo expression fragment assembly from Spanning Trees (EAST). ICCABS (2012)
James T. Morton, Patricia Abrudan, Chun Liang, John E. Karro
Poster: Sequence classification of homopolymer emissions (SCOPE). ICCABS (2012)
Yuan Zhang, Dhananjai Madhava Rao, Jens Mueller, Mufit Ozden, Chun Liang, John E. Karro
-based MST approach. ICCABS (2011)
Dhananjai Madhava Rao, J. C. Moler, Mufit Ozden, Y. Zhang, C. Liang, John E. Karro
PEACE: Parallel Environment for Assembly and Clustering of Gene Expression. Nucleic Acids Res. 38 (Web-Server-Issue) (2010)
Martin Peifer, John E. Karro, H. H. von Grünberg
transition rate during the mammalian radiation? Bioinform. 24 (19) (2008)
John E. Karro, Yangpan Yan, Deyou Zheng, Zhaolei Zhang, Nicholas Carriero, Philip Cayting, Paul M. Harrison, Mark Gerstein
Pseudogene.org: a comprehensive database and comparison platform for pseudogene annotation. Nucleic Acids Res. 35 (Database-Issue) (2007)
Zhaolei Zhang, Nicholas Carriero, Deyou Zheng, John E. Karro, Paul M. Harrison, Mark Gerstein
PseudoPipe: an automated pseudogene identification pipeline. Bioinform. 22 (12) (2006)