Jiawen Yao

Publication Activity (10 Years)

Years Active: 2014-2024
Publications (10 Years): 56

Top Topics

Colorectal Cancer

Survival Prediction

Contextual Bandit

Top Venues

Medical Image Anal.

Publications

Zhimin Ding, Jiawen Yao, Brianna Barrow, Tania Lorido-Botran, Christopher M. Jermaine, Yuxin Tang, Jiehui Li, Xinyu Yao, Sleem Mahmoud Abdelghafar, Daniel Bourgeois
TURNIP: A "Nondeterministic" GPU Runtime with CPU RAM Offload. CoRR (2024)
Jiawen Yao
Info-Motion: Using the Metaphor of Plant Motion for Information Communication in Shape-changing Interface: Info-motion. TEI (2024)
Guangyu Guo, Jiawen Yao, Yingda Xia, Tony C. W. Mok, Zhilin Zheng, Junwei Han, Le Lu, Dingwen Zhang, Jian Zhou, Ling Zhang
Boosting Medical Image-based Cancer Detection via Text-guided Supervision from Reports. CoRR (2024)
Quan Liu, Jiawen Yao, Lisha Yao, Xin Chen, Jingren Zhou, Le Lu, Ling Zhang, Zaiyi Liu, Yuankai Huo
Fusion: Bayesian-based Multimodal Multi-level Fusion on Colorectal Cancer Microsatellite Instability Prediction. CoRR (2024)
Wei Fang, Yuxing Tang, Heng Guo, Mingze Yuan, Tony C. W. Mok, Ke Yan, Jiawen Yao, Xin Chen, Zaiyi Liu, Le Lu, Ling Zhang, Minfeng Xu
CycleINR: Cycle Implicit Neural Representation for Arbitrary-Scale Volumetric Super-Resolution of Medical Data. CoRR (2024)
Jieneng Chen, Yingda Xia, Jiawen Yao, Ke Yan, Jianpeng Zhang, Le Lu, Fakai Wang, Bo Zhou, Mingyan Qiu, Qihang Yu, Mingze Yuan, Wei Fang, Yuxing Tang, Minfeng Xu, Jian Zhou, Yuqian Zhao, Qifeng Wang, Xianghua Ye, Xiaoli Yin, Yu Shi, Xin Chen, Jingren Zhou, Alan L. Yuille, Zaiyi Liu, Ling Zhang
Towards a Single Unified Model for Effective Detection, Segmentation, and Diagnosis of Eight Major Cancers Using a Large Collection of CT Scans. CoRR (2023)
Jieneng Chen, Yingda Xia, Jiawen Yao, Ke Yan, Jianpeng Zhang, Le Lu, Fakai Wang, Bo Zhou, Mingyan Qiu, Qihang Yu, Mingze Yuan, Wei Fang, Yuxing Tang, Minfeng Xu, Jian Zhou, Yuqian Zhao, Qifeng Wang, Xianghua Ye, Xiaoli Yin, Yu Shi, Xin Chen, Jingren Zhou, Alan L. Yuille, Zaiyi Liu, Ling Zhang
CancerUniT: Towards a Single Unified Model for Effective Detection, Segmentation, and Diagnosis of Eight Major Cancers Using a Large Collection of CT Scans. ICCV (2023)
Ke Yan, Xiaoli Yin, Yingda Xia, Fakai Wang, Shu Wang, Yuan Gao, Jiawen Yao, Chunli Li, Xiaoyu Bai, Jingren Zhou, Ling Zhang, Le Lu, Yu Shi
Liver Tumor Screening and Diagnosis in CT with Pixel-Lesion-Patient Network. MICCAI (5) (2023)
Zhilin Zheng, Xu Fang, Jiawen Yao, Mengmeng Zhu, Le Lu, Lingyun Huang, Jing Xiao, Yu Shi, Hong Lu, Jianping Lu, Ling Zhang, Chengwei Shao, Yun Bian
A deep local attention network for pre-operative lymph node metastasis prediction in pancreatic cancer via multiphase CT imaging. CoRR (2023)
Ke Yan, Xiaoli Yin, Yingda Xia, Fakai Wang, Shu Wang, Yuan Gao, Jiawen Yao, Chunli Li, Xiaoyu Bai, Jingren Zhou, Ling Zhang, Le Lu, Yu Shi
Liver Tumor Screening and Diagnosis in CT with Pixel-Lesion-Patient Network. CoRR (2023)
Hexin Dong, Jiawen Yao, Yuxing Tang, Mingze Yuan, Yingda Xia, Jian Zhou, Hong Lu, Jingren Zhou, Bin Dong, Le Lu, Li Zhang, Zaiyi Liu, Yu Shi, Ling Zhang
Improved Prognostic Prediction of Pancreatic Cancer Using Multi-Phase CT by Integrating Neural Distance and Texture-Aware Transformer. CoRR (2023)
Mingze Yuan, Yingda Xia, Xin Chen, Jiawen Yao, Junli Wang, Mingyan Qiu, Hexin Dong, Jingren Zhou, Bin Dong, Le Lu, Li Zhang, Zaiyi Liu, Ling Zhang
Cluster-Induced Mask Transformers for Effective Opportunistic Gastric Cancer Screening on Non-contrast CT Scans. CoRR (2023)
Tony C. W. Mok, Zi Li, Yingda Xia, Jiawen Yao, Ling Zhang, Jingren Zhou, Le Lu
Deformable Medical Image Registration Under Distribution Shifts with Neural Instance Optimization. MLMI@MICCAI (1) (2023)
Bo Zhou, Yingda Xia, Jiawen Yao, Le Lu, Jingren Zhou, Chi Liu, James S. Duncan, Ling Zhang
Meta-information-Aware Dual-path Transformer for Differential Diagnosis of Multi-type Pancreatic Lesions in Multi-phase CT. IPMI (2023)
Mingze Yuan, Yingda Xia, Hexin Dong, Zifan Chen, Jiawen Yao, Mingyan Qiu, Ke Yan, Xiaoli Yin, Yu Shi, Xin Chen, Zaiyi Liu, Bin Dong, Jingren Zhou, Le Lu, Ling Zhang, Li Zhang
Devil is in the Queries: Advancing Mask Transformers for Real-world Medical Image Segmentation and Out-of-Distribution Localization. CVPR (2023)
Quan Liu, Jiawen Yao, Lisha Yao, Xin Chen, Jingren Zhou, Le Lu, Ling Zhang, Zaiyi Liu, Yuankai Huo
Fusion: Bayesian-Based Multimodal Multi-level Fusion on Colorectal Cancer Microsatellite Instability Prediction. MTSAIL/LEAF/AI4Treat/MMMI/REMIA@MICCAI (2023)
Hexin Dong, Jiawen Yao, Yuxing Tang, Mingze Yuan, Yingda Xia, Jian Zhou, Hong Lu, Jingren Zhou, Bin Dong, Le Lu, Zaiyi Liu, Li Zhang, Yu Shi, Ling Zhang
Improved Prognostic Prediction of Pancreatic Cancer Using Multi-phase CT by Integrating Neural Distance and Texture-Aware Transformer. MICCAI (5) (2023)
Mingze Yuan, Yingda Xia, Xin Chen, Jiawen Yao, Junli Wang, Mingyan Qiu, Hexin Dong, Jingren Zhou, Bin Dong, Le Lu, Li Zhang, Zaiyi Liu, Ling Zhang
Cluster-Induced Mask Transformers for Effective Opportunistic Gastric Cancer Screening on Non-contrast CT Scans. MICCAI (5) (2023)
Mingze Yuan, Yingda Xia, Hexin Dong, Zifan Chen, Jiawen Yao, Mingyan Qiu, Ke Yan, Xiaoli Yin, Yu Shi, Xin Chen, Zaiyi Liu, Bin Dong, Jingren Zhou, Le Lu, Ling Zhang, Li Zhang
Devil is in the Queries: Advancing Mask Transformers for Real-world Medical Image Segmentation and Out-of-Distribution Localization. CoRR (2023)
Bo Zhou, Yingda Xia, Jiawen Yao, Le Lu, Jingren Zhou, Chi Liu, James S. Duncan, Ling Zhang
Meta-information-aware Dual-path Transformer for Differential Diagnosis of Multi-type Pancreatic Lesions in Multi-phase CT. CoRR (2023)
Chunyuan Li, Xinliang Zhu, Jiawen Yao, Junzhou Huang
Hierarchical Transformer for Survival Prediction Using Multimodality Whole Slide Images and Genomics. ICPR (2022)
Lisha Yao, Yingda Xia, Haochen Zhang, Jiawen Yao, Dakai Jin, Bingjiang Qiu, Yuan Zhang, Suyun Li, Yanting Liang, Xian-Sheng Hua, Le Lu, Xin Chen, Zaiyi Liu, Ling Zhang
DeepCRC: Colorectum and Colorectal Cancer Segmentation in CT Scans via Deep Colorectal Coordinate Transform. MICCAI (3) (2022)
Chunyuan Li, Xinliang Zhu, Jiawen Yao, Junzhou Huang
Hierarchical Transformer for Survival Prediction Using Multimodality Whole Slide Images and Genomics. CoRR (2022)
Jiawen Yao, Xianghua Ye, Yingda Xia, Jian Zhou, Yu Shi, Ke Yan, Fang Wang, Lili Lin, Haogang Yu, Xian-Sheng Hua, Le Lu, Dakai Jin, Ling Zhang
Effective Opportunistic Esophageal Cancer Screening Using Noncontrast CT Imaging. MICCAI (3) (2022)
Tianyi Zhao, Kai Cao, Jiawen Yao, Isabella Nogues, Le Lu, Lingyun Huang, Jing Xiao, Zhaozheng Yin, Ling Zhang
3D Graph Anatomy Geometry-Integrated Network for Pancreatic Mass Segmentation, Diagnosis, and Quantitative Patient Management. CVPR (2021)
Yingda Xia, Jiawen Yao, Le Lu, Lingyun Huang, Guotong Xie, Jing Xiao, Alan L. Yuille, Kai Cao, Ling Zhang
Effective Pancreatic Cancer Screening on Non-contrast CT Scans via Anatomy-Aware Transformers. MICCAI (5) (2021)
Jiawen Yao, Yu Shi, Kai Cao, Le Lu, Jianping Lu, Qike Song, Gang Jin, Jing Xiao, Yang Hou, Ling Zhang
DeepPrognosis: Preoperative prediction of pancreatic cancer survival and surgical margin via comprehensive understanding of dynamic contrast-enhanced CT imaging and tumor-vascular contact parsing. Medical Image Anal. 73 (2021)
Ling Zhang, Yu Shi, Jiawen Yao, Yun Bian, Kai Cao, Dakai Jin, Jing Xiao, Le Lu
Robust Pancreatic Ductal Adenocarcinoma Segmentation with Multi-institutional Multi-phase Partially-Annotated CT Scans. MICCAI (4) (2020)
Jiawen Yao, Yu Shi, Le Lu, Jing Xiao, Ling Zhang
DeepPrognosis: Preoperative Prediction of Pancreatic Cancer Survival and Surgical Margin via Contrast-Enhanced CT Imaging. MICCAI (2) (2020)
Jiawen Yao, Xinliang Zhu, Jitendra Jonnagaddala, Nicholas J. Hawkins, Junzhou Huang
Whole Slide Images based Cancer Survival Prediction using Attention Guided Deep Multiple Instance Learning Networks. CoRR (2020)
Ashwin Raju, Jiawen Yao, Mohammad MinHazul Haq, Jitendra Jonnagaddala, Junzhou Huang
Graph Attention Multi-instance Learning for Accurate Colorectal Cancer Staging. MICCAI (5) (2020)
Jiawen Yao, Yu Shi, Le Lu, Jing Xiao, Ling Zhang
DeepPrognosis: Preoperative Prediction of Pancreatic Cancer Survival and Surgical Margin via Contrast-Enhanced CT Imaging. CoRR (2020)
Jiawen Yao, Xinliang Zhu, Jitendra Jonnagaddala, Nicholas J. Hawkins, Junzhou Huang
Whole slide images based cancer survival prediction using attention guided deep multiple instance learning networks. Medical Image Anal. 65 (2020)
Tianyi Zhao, Kai Cao, Jiawen Yao, Isabella Nogues, Le Lu, Lingyun Huang, Jing Xiao, Zhaozheng Yin, Ling Zhang
3D Graph Anatomy Geometry-Integrated Network for Pancreatic Mass Segmentation, Diagnosis, and Quantitative Patient Management. CoRR (2020)
Ling Zhang, Yu Shi, Jiawen Yao, Yun Bian, Kai Cao, Dakai Jin, Jing Xiao, Le Lu
Robust Pancreatic Ductal Adenocarcinoma Segmentation with Multi-Institutional Multi-Phase Partially-Annotated CT Scans. CoRR (2020)
Bo Zhou, Adam P. Harrison, Jiawen Yao, Chi-Tung Cheng, Jing Xiao, Chien-Hung Liao, Le Lu
CT Data Curation for Liver Patients: Phase Recognition in Dynamic Contrast-Enhanced CT. DART/MIL3ID@MICCAI (2019)
Jiawen Yao, Xinliang Zhu, Junzhou Huang
Deep Multi-instance Learning for Survival Prediction from Whole Slide Images. MICCAI (1) (2019)
Jiawen Yao, Jinzheng Cai, Dong Yang, Daguang Xu, Junzhou Huang
Integrating 3D Geometry of Organ for Improving Medical Image Segmentation. MICCAI (5) (2019)
Bo Zhou, Adam P. Harrison, Jiawen Yao, Chi-Tung Cheng, Jing Xiao, Chien-Hung Liao, Le Lu
CT Data Curation for Liver Patients: Phase Recognition in Dynamic Contrast-Enhanced CT. CoRR (2019)
Jiexin Lyu, Jiawen Yao, Ankit Bansal
Lemusade: Make Lemonade Using Music. ICMI (Adjunct) (2019)
Chaochao Yan, Jiawen Yao, Ruoyu Li, Zheng Xu, Junzhou Huang
Weakly Supervised Deep Learning for Thoracic Disease Classification and Localization on Chest X-rays. CoRR (2018)
Ruoyu Li, Jiawen Yao, Xinliang Zhu, Yeqing Li, Junzhou Huang
Graph CNN for Survival Analysis on Whole Slide Pathological Images. MICCAI (2) (2018)
Xin Liu, Jiawen Yao, Xiaopeng Hong, Xiaohua Huang, Ziheng Zhou, Chun Qi, Guoying Zhao
Background Subtraction Using Spatio-Temporal Group Sparsity Recovery. IEEE Trans. Circuits Syst. Video Technol. 28 (8) (2018)
Zhibin Zhu, Jiawen Yao, Zheng Xu, Junzhou Huang, Benxin Zhang
A simple primal-dual algorithm for nuclear norm and total variation regularization. Neurocomputing 289 (2018)
Feiyun Zhu, Peng Liao, Xinliang Zhu, Jiawen Yao, Junzhou Huang
Cohesion-driven Online Actor-Critic Reinforcement Learning for mHealth Intervention. BCB (2018)
Chaochao Yan, Jiawen Yao, Ruoyu Li, Zheng Xu, Junzhou Huang
Weakly Supervised Deep Learning for Thoracic Disease Classification and Localization on Chest X-rays. BCB (2018)
Jiawen Yao, Zheng Xu, Xiaolei Huang, Junzhou Huang
An efficient algorithm for dynamic MRI using low-rank and total variation regularizations. Medical Image Anal. 44 (2018)
Feiyun Zhu, Xinliang Zhu, Sheng Wang, Jiawen Yao, Zhichun Xiao, Junzhou Huang
Robust Contextual Bandit via the Capped- ℓ _2 ℓ 2 Norm for Mobile Health Intervention. MLMI@MICCAI (2018)
Jiawen Yao, Xinliang Zhu, Feiyun Zhu, Junzhou Huang
Deep Correlational Learning for Survival Prediction from Multi-modality Data. MICCAI (2) (2017)
Feiyun Zhu, Xinliang Zhu, Sheng Wang, Jiawen Yao, Junzhou Huang
Robust Contextual Bandit via the Capped-$\ell_{2}$ norm. CoRR (2017)
Xinliang Zhu, Jiawen Yao, Feiyun Zhu, Junzhou Huang
WSISA: Making Survival Prediction from Whole Slide Histopathological Images. CVPR (2017)
Xinliang Zhu, Jiawen Yao, Xin Luo, Guanghua Xiao, Yang Xie, Adi Gazdar, Junzhou Huang
Lung cancer survival prediction from pathological images and genetic data - An integration study. ISBI (2016)
Xinliang Zhu, Jiawen Yao, Guanghua Xiao, Yang Xie, Jaime Rodriguez-Canales, Edwin R. Parra, Carmen Behrens, Ignacio I. Wistuba, Junzhou Huang
Imaging-genetic data mapping for clinical outcome prediction via supervised conditional Gaussian graphical model. BIBM (2016)
Jiawen Yao, Sheng Wang, Xinliang Zhu, Junzhou Huang
Imaging Biomarker Discovery for Lung Cancer Survival Prediction. MICCAI (2) (2016)
Xinliang Zhu, Jiawen Yao, Junzhou Huang
Deep convolutional neural network for survival analysis with pathological images. BIBM (2016)
Sheng Wang, Jiawen Yao, Zheng Xu, Junzhou Huang
Subtype Cell Detection with an Accelerated Deep Convolution Neural Network. MICCAI (2) (2016)
Jiawen Yao, Dheeraj Ganti, Xin Luo, Guanghua Xiao, Yang Xie, Shirley Yan, Junzhou Huang
Computer-Assisted Diagnosis of Lung Cancer Using Quantitative Topology Features. MLMI (2015)
Xin Liu, Guoying Zhao, Jiawen Yao, Chun Qi
Background Subtraction Based on Low-Rank and Structured Sparse Decomposition. IEEE Trans. Image Process. 24 (8) (2015)
Jiawen Yao, Zheng Xu, Xiaolei Huang, Junzhou Huang
Accelerated Dynamic MRI Reconstruction with Total Variation and Nuclear Norm Regularization. MICCAI (2) (2015)
Jiawen Yao, Xin Liu, Chun Qi
Foreground detection using low rank and structured sparsity. ICME (2014)