Jeffrey D. Varner

Publication Activity (10 Years)

Years Active: 2004-2018
Publications (10 Years): 4

Top Topics

Dynamic Optimization

Programming Language

Parameter Estimates

Demographic Data

Top Venues

BMC Syst. Biol.

PLoS Comput. Biol.

Publications

Adithya Sagar, Rachel LeCover, Christine Ann Shoemaker, Jeffrey D. Varner
Dynamic Optimization with Particle Swarms (DOPS): a meta-heuristic for parameter estimation in biochemical models. BMC Syst. Biol. 12 (1) (2018)
Mengrou Shan, David Dai, Arunodai Vudem, Jeffrey D. Varner, Abraham Duncan Stroock
Multi-scale computational study of the Warburg effect, reverse Warburg effect and glutamine addiction in solid tumors. PLoS Comput. Biol. 14 (12) (2018)
David M. Bassen, Michael Vilkhovoy, Mason Minot, Jonathan T. Butcher, Jeffrey D. Varner
JuPOETs: a constrained multiobjective optimization approach to estimate biochemical model ensembles in the Julia programming language. BMC Syst. Biol. 11 (1) (2017)
Russell Gould, David M. Bassen, Anirikh Chakrabarti, Jeffrey D. Varner, Jonathan T. Butcher
Population Heterogeneity in the Epithelial to Mesenchymal Transition Is Controlled by NFAT and Phosphorylated Sp1. PLoS Comput. Biol. 12 (12) (2016)
Joshua Lequieu, Anirikh Chakrabarti, Satyaprakash Nayak, Jeffrey D. Varner
Computational Modeling and Analysis of Insulin Induced Eukaryotic Translation Initiation. PLoS Comput. Biol. 7 (11) (2011)
Deyan Luan, Michael Zai, Jeffrey D. Varner
Computationally Derived Points of Fragility of a Human Cascade Are Consistent with Current Therapeutic Strategies. PLoS Comput. Biol. 3 (7) (2007)
Anshuman Gupta, Jeffrey D. Varner, Costas D. Maranas
Large-scale inference of the transcriptional regulation of Bacillus subtilis. Comput. Chem. Eng. 29 (3) (2005)
Madhukar S. Dasika, Anshuman Gupta, Costas D. Maranas, Jeffrey D. Varner
A Mixed Integer Linear Programming (MILP) Framework for Inferring Time Delay in Gene Regulatory Networks. Pacific Symposium on Biocomputing (2004)