Hwee Kim

Publication Activity (10 Years)

Years Active: 2014-2022
Publications (10 Years): 30

Top Topics

Formal Languages

Occurrence Probabilities

Finite Automata

Top Venues

Theor. Comput. Sci.

Publications

Szilárd Zsolt Fazekas, Hwee Kim, Ryuichi Matsuoka, Shinnosuke Seki, Hinano Takeuchi
On Algorithmic Self-Assembly of Squares by Co-Transcriptional Folding. ISAAC (2022)
Yo-Sub Han, Hwee Kim
Impossibility of strict assembly of infinite fractals by oritatami. Nat. Comput. 20 (4) (2021)
Szilárd Zsolt Fazekas, Hwee Kim, Ryuichi Matsuoka, Reoto Morita, Shinnosuke Seki
Linear Bounds on the Size of Conformations in Greedy Deterministic Oritatami. Int. J. Found. Comput. Sci. 32 (5) (2021)
James Garrett, Natasa Jonoska, Hwee Kim, Masahico Saito
DNA origami words, graphical structures and their rewriting systems. Nat. Comput. 20 (2) (2021)
Yo-Sub Han, Hwee Kim, Yusei Masuda, Shinnosuke Seki
A general architecture of oritatami systems for simulating arbitrary finite automata. Theor. Comput. Sci. 870 (2021)
Natasa Jonoska, Masahico Saito, Hwee Kim, Brad Mostowski
Symbol Separation in Double Occurrence Words. Int. J. Found. Comput. Sci. 31 (7) (2020)
Yo-Sub Han, Hwee Kim, Shinnosuke Seki
Transcript design problem of oritatami systems. Nat. Comput. 19 (2) (2020)
Da-Jung Cho, Yo-Sub Han, Hwee Kim
Bound-decreasing duplication system. Theor. Comput. Sci. 793 (2019)
Yo-Sub Han, Hwee Kim, Yusei Masuda, Shinnosuke Seki
A General Architecture of Oritatami Systems for Simulating Arbitrary Finite Automata. CIAA (2019)
Yo-Sub Han, Hwee Kim, Yusei Masuda, Shinnosuke Seki
A general architecture of oritatami systems for simulating arbitrary finite automata. CoRR (2019)
Yo-Sub Han, Hwee Kim
Ruleset optimization on isomorphic oritatami systems. Theor. Comput. Sci. 785 (2019)
James Garrett, Natasa Jonoska, Hwee Kim, Masahico Saito
DNA Origami Words and Rewriting Systems. UCNC (2019)
James Garrett, Natasa Jonoska, Hwee Kim, Masahico Saito
Algebraic Systems Motivated by DNA Origami. CAI (2019)
Yo-Sub Han, Hwee Kim
Cyclic Oritatami Systems Cannot Fold Infinite Fractal Curves. CoRR (2019)
Yo-Sub Han, Hwee Kim, Trent A. Rogers, Shinnosuke Seki
Self-Attraction Removal from Oritatami Systems. Int. J. Found. Comput. Sci. 30 (6-7) (2019)
Yo-Sub Han, Hwee Kim, Shinnosuke Seki
Transcript Design Problem of Oritatami Systems. DNA (2018)
Yo-Sub Han, Hwee Kim, Makoto Ota, Shinnosuke Seki
Nondeterministic seedless oritatami systems and hardness of testing their equivalence. Nat. Comput. 17 (1) (2018)
Da-Jung Cho, Yo-Sub Han, Hwee Kim, Kai Salomaa
Site-Directed Deletion. DLT (2018)
Yo-Sub Han, Hwee Kim
Construction of Geometric Structure by Oritatami System. DNA (2018)
Yo-Sub Han, Hwee Kim, Trent A. Rogers, Shinnosuke Seki
Self-attraction Removal from Oritatami Systems. DCFS (2017)
Da-Jung Cho, Yo-Sub Han, Hwee Kim
Deduplication on Finite Automata and Nested Duplication Systems. UCNC (2017)
Yo-Sub Han, Hwee Kim
Ruleset Optimization on Isomorphic Oritatami Systems. DNA (2017)
Da-Jung Cho, Yo-Sub Han, Shin-Dong Kang, Hwee Kim, Sang-Ki Ko, Kai Salomaa
Pseudo-inversion: closure properties and decidability. Nat. Comput. 15 (1) (2016)
Da-Jung Cho, Yo-Sub Han, Hwee Kim, Alexandros Palioudakis, Kai Salomaa
Duplications and Pseudo-Duplications. Int. J. Unconv. Comput. 12 (2-3) (2016)
Yo-Sub Han, Hwee Kim, Makoto Ota, Shinnosuke Seki
Nondeterministic Seedless Oritatami Systems and Hardness of Testing Their Equivalence. DNA (2016)
Hwee Kim, Yo-Sub Han
OMPPM: online multiple palindrome pattern matching. Bioinform. 32 (8) (2016)
Da-Jung Cho, Yo-Sub Han, Hwee Kim, Alexandros Palioudakis, Kai Salomaa
Duplications and Pseudo-Duplications. UCNC (2015)
Hwee Kim, Yo-Sub Han
Non-overlapping inversion on strings and languages. Theor. Comput. Sci. 592 (2015)
Da-Jung Cho, Yo-Sub Han, Hwee Kim
Frequent Pattern Mining with Non-overlapping Inversions. LATA (2015)
Da-Jung Cho, Yo-Sub Han, Hwee Kim
Alignment with non-overlapping inversions and translocations on two strings. Theor. Comput. Sci. 575 (2015)
Da-Jung Cho, Yo-Sub Han, Hwee Kim
Alignment with Non-overlapping Inversions on Two Strings. WALCOM (2014)
Hwee Kim, Yo-Sub Han
Space-Efficient Approximate String Matching Allowing Inversions in Fast Average Time. FAW (2014)
Hwee Kim, Yo-Sub Han
Online Multiple Palindrome Pattern Matching. SPIRE (2014)
Da-Jung Cho, Yo-Sub Han, Shin-Dong Kang, Hwee Kim, Sang-Ki Ko, Kai Salomaa
Pseudo-inversion on Formal Languages. UCNC (2014)