Hongwu Ma

Publication Activity (10 Years)

Years Active: 2001-2023
Publications (10 Years): 4

Top Topics

Multiagent Learning

Subgraph Isomorphism

Top Venues

Nucleic Acids Res.

J. Integr. Bioinform.

Publications

Zhitao Mao, Qianqian Yuan, Haoran Li, Yue Zhang, Yuanyuan Huang, Chunhe Yang, Ruoyu Wang, Yongfu Yang, Yalun Wu, Shihui Yang, Xiaoping Liao, Hongwu Ma
CAVE: a cloud-based platform for analysis and visualization of metabolic pathways. Nucleic Acids Res. 51 (W1) (2023)
Yi Yang, Yufeng Mao, Ruoyu Wang, Haoran Li, Ye Liu, Haijiao Cheng, Zhenkun Shi, Yu Wang, Meng Wang, Ping Zheng, Xiaoping Liao, Hongwu Ma
AutoESD: a web tool for automatic editing sequence design for genetic manipulation of microorganisms. Nucleic Acids Res. 50 (W1) (2022)
Zhenkun Shi, Qianqian Yuan, Ruoyu Wang, Hoaran Li, Xiaoping Liao, Hongwu Ma
ECRECer: Enzyme Commission Number Recommendation and Benchmarking based on Multiagent Dual-core Learning. CoRR (2022)
Zhitao Mao, Ruoyu Wang, Haoran Li, Yixin Huang, Qiang Zhang, Xiaoping Liao, Hongwu Ma
regulatory landscape through graph database. Nucleic Acids Res. 50 (W1) (2022)
Larisa Kiseleva, Sofya K. Garushyants, Hongwu Ma, David J. W. Simpson, Viatcheslav Fedorovich, Michael F. Cohen, Igor Goryanin
Taxonomic and functional metagenomic analysis of anodic communities in two pilot-scale microbial fuel cells treating different industrial wastewaters. J. Integr. Bioinform. 12 (3) (2015)
Zhe Liu, Hongwu Ma, Igor Goryanin
A semi-automated genome annotation comparison and integration scheme. BMC Bioinform. 14 (2013)
Tong Hao, Hongwu Ma, Xue-Ming Zhao, Igor Goryanin
Compartmentalization of the Edinburgh Human Metabolic Network. BMC Bioinform. 11 (2010)
Jiri Barnat, Lubos Brim, Ivana Cerná, Sven Drazan, Jana Fabriková, Jan Láník, David Safránek, Hongwu Ma
BioDiVinE: A Framework for Parallel Analysis of Biological Models COMPMOD (2009)
Marcio Rosa da Silva, Hongwu Ma, An-Ping Zeng
Centrality, Network Capacity, and Modularity as Parameters to Analyze the Core-Periphery Structure in Metabolic Networks. Proc. IEEE 96 (8) (2008)
Yizhi Cai, Bryony Davidson, Hongwu Ma, Chris French
Modeling the arsenic biosensor system. BMC Syst. Biol. 1 (S-1) (2007)
Chris French, Judith Nicholson, Farid Bizzari, Jelena Aleksic, Yizhi Cai, Sreemati Seshasayee, Sergii Ivakhno, Bryony Davidson, Jen Wilson, Kim de Mora, Hongwu Ma, Laszlo Kozma-Bognar, Alistair Elfick
Arsenic biosenseor: a step further. BMC Syst. Biol. 1 (S-1) (2007)
Qingzhao Wang, Yudi Yang, Hongwu Ma, Xue-Ming Zhao
Metabolic network properties help assign weights to elementary modes to understand physiological flux distributions. Bioinform. 23 (9) (2007)
Tim Van den Bulcke, Koen Van Leemput, Bart Naudts, Piet van Remortel, Hongwu Ma, Alain Verschoren, Bart De Moor, Kathleen Marchal
SynTReN: a generator of synthetic gene expression data for design and analysis of structure learning algorithms. BMC Bioinform. 7 (2006)
Hongwu Ma, Jan Buer, An-Ping Zeng
transcriptional regulatory network revealed by a new top-down approach. BMC Bioinform. 5 (2004)
Hongwu Ma, Xue-Ming Zhao, Ying-Jin Yuan, An-Ping Zeng
Decomposition of metabolic network into functional modules based on the global connectivity structure of reaction graph. Bioinform. 20 (12) (2004)
Hongwu Ma, An-Ping Zeng
The Connectivity Structure, Giant Strong Component and Centrality of Metabolic Networks. Bioinform. 19 (11) (2003)
Hongwu Ma, An-Ping Zeng
Reconstruction of metabolic networks from genome data and analysis of their global structure for various organisms. Bioinform. 19 (2) (2003)
Hongwu Ma, Xiaofeng Guo, Xue-Ming Zhao
Pathway Analysis of Bacillus subtillis Metabolic Network Based on Genomic Information. German Conference on Bioinformatics (2001)