Habib Zaidi

Publication Activity (10 Years)

Years Active: 1998-2024
Publications (10 Years): 47

Top Topics

Machine Learning

Magnetic Resonance

Myocardial Perfusion

Top Venues

Comput. Biol. Medicine

J. Digit. Imaging

Medical Image Anal.

Publications

Chang Sun, Yazdan Salimi, Neroladaki Angeliki, Sana Boudabbous, Habib Zaidi
An efficient dual-domain deep learning network for sparse-view CT reconstruction. Comput. Methods Programs Biomed. 256 (2024)
Ghasem Hajianfar, Seyyed Ali Hosseini, Sara Bagherieh, Mehrdad Oveisi, Isaac Shiri, Habib Zaidi
Impact of harmonization on the reproducibility of MRI radiomic features when using different scanners, acquisition parameters, and image pre-processing techniques: a phantom study. Medical Biol. Eng. Comput. 62 (8) (2024)
Imene Mecheter, Maysam Abbod, Habib Zaidi, Abbes Amira
Transfer learning from T1-weighted to T2-weighted Magnetic resonance sequences for brain image segmentation. CAAI Trans. Intell. Technol. 9 (1) (2024)
Isaac Shiri, Behrooz Razeghi, Sohrab Ferdowsi, Yazdan Salimi, Deniz Gündüz, Douglas Teodoro, Slava Voloshynovskiy, Habib Zaidi
PRIMIS: Privacy-preserving medical image sharing via deep sparsifying transform learning with obfuscation. J. Biomed. Informatics 150 (2024)
Hossein Arabi, Habib Zaidi
Single annotator versus multi-annotator: Challenge of segmenting two neighboring hippocampus head and body with high precision. Biomed. Signal Process. Control. 97 (2024)
Isaac Shiri, Yazdan Salimi, Abdollah Saberi, Masoumeh Pakbin, Ghasem Hajianfar, Atlas Haddadi Avval, Amirhossein Sanaat, Azadeh Akhavanallaf, Shayan Mostafaei, Zahra Mansouri, Dariush Askari, Mohammadreza Ghasemian, Ehsan Sharifipour, Saleh Sandoughdaran, Ahmad Sohrabi, Elham Sadati, Somayeh Livani, Pooya Iranpour, Shahriar Kolahi, Bardia Khosravi, Maziar Khateri, Salar Bijari, Mohammad Reza Atashzar, Sajad P. Shayesteh, Mohammad Reza Babaei, Elnaz Jenabi, Mohammad Hasanian, Alireza Shahhamzeh, Seyed Yaser Foroghi Ghomi, Abolfazl Mozafari, Hesamaddin Shirzad-Aski, Fatemeh Movaseghi, Rama Bozorgmehr, Neda Goharpey, Hamid Abdollahi, Parham Geramifar, Amir Reza Radmard, Hossein Arabi, Kiara Rezaei-Kalantari, Mehrdad Oveisi, Arman Rahmim, Habib Zaidi
Differentiation of COVID-19 pneumonia from other lung diseases using CT radiomic features and machine learning: A large multicentric cohort study. Int. J. Imaging Syst. Technol. 34 (2) (2024)
Maziar Sabouri, Shadab Ahamed, Azin Asadzadeh, Atlas Haddadi Avval, Soroush Bagheri, Mohsen Arabi, Seyed Rasoul Zakavi, Emran Askari, Ali Rasouli, Atena Aghaee, Mohaddese Sehati, Fereshteh Yousefirizi, Carlos F. Uribe, Ghasem Hajianfar, Habib Zaidi, Arman Rahmim
Thyroidiomics: An Automated Pipeline for Segmentation and Classification of Thyroid Pathologies from Scintigraphy Images. CoRR (2024)
Amirhosein Toosi, Isaac Shiri, Habib Zaidi, Arman Rahmim
Segmentation-Free Outcome Prediction in Head and Neck Cancer: Deep Learning-based Feature Extraction from Multi-Angle Maximum Intensity Projections (MA-MIPs) of PET Images. CoRR (2024)
Haniyeh Taleie, Ghasem Hajianfar, Maziar Sabouri, Mozhgan Parsaee, Golnaz Houshmand, Ahmad Bitarafan-rajabi, Habib Zaidi, Isaac Shiri
Left Ventricular Myocardial Dysfunction Evaluation in Thalassemia Patients Using Echocardiographic Radiomic Features and Machine Learning Algorithms. J. Digit. Imaging 36 (6) (2023)
Mobin Mohebi, Mehdi Amini, Mohammad Javad Alemzadeh-Ansari, Azin Alizadehasl, Ahmad Bitarafan-rajabi, Isaac Shiri, Habib Zaidi, Mahdi Orooji
Post-revascularization Ejection Fraction Prediction for Patients Undergoing Percutaneous Coronary Intervention Based on Myocardial Perfusion SPECT Imaging Radiomics: a Preliminary Machine Learning Study. J. Digit. Imaging 36 (4) (2023)
Isaac Shiri, Behrooz Razeghi, Alireza Vafaei Sadr, Mehdi Amini, Yazdan Salimi, Sohrab Ferdowsi, Peter Boor, Deniz Gündüz, Slava Voloshynovskiy, Habib Zaidi
Multi-institutional PET/CT image segmentation using federated deep transformer learning. Comput. Methods Programs Biomed. 240 (2023)
Maziar Sabouri, Ghasem Hajianfar, Zahra Hosseini, Mehdi Amini, Mobin Mohebi, Tahereh Ghaedian, Shabnam Madadi, Fereydoon Rastgou, Mehrdad Oveisi, Ahmad Bitarafan-rajabi, Isaac Shiri, Habib Zaidi
Myocardial Perfusion SPECT Imaging Radiomic Features and Machine Learning Algorithms for Cardiac Contractile Pattern Recognition. J. Digit. Imaging 36 (2) (2023)
Elham Avard, Isaac Shiri, Ghasem Hajianfar, Hamid Abdollahi, Kiara Rezaei Kalantari, Golnaz Houshmand, Kianosh Kasani, Ahmad Bitarafan-rajabi, Mohammad Reza Deevband, Mehrdad Oveisi, Habib Zaidi
Non-contrast Cine Cardiac Magnetic Resonance image radiomics features and machine learning algorithms for myocardial infarction detection. Comput. Biol. Medicine 141 (2022)
Fatemeh Arian, Mehdi Amini, Shayan Mostafaei, Kiara Rezaei-Kalantari, Atlas Haddadi Avval, Zahra Shahbazi, Kianosh Kasani, Ahmad Bitarafan-rajabi, Saikat Chatterjee, Mehrdad Oveisi, Isaac Shiri, Habib Zaidi
Myocardial Function Prediction After Coronary Artery Bypass Grafting Using MRI Radiomic Features and Machine Learning Algorithms. J. Digit. Imaging 35 (6) (2022)
Samaneh Mostafapour, Faeze Gholamiankhah, Sirwan Maroufpour, Mehdi Momennezhad, Mohsen Asadinezhad, Seyed Rasoul Zakavi, Hossein Arabi, Habib Zaidi
Deep learning-guided attenuation correction in the image domain for myocardial perfusion SPECT imaging. J. Comput. Des. Eng. 9 (2) (2022)
Amir Jabbarpour, Seied Rabi Mahdavi, Alireza Vafaei Sadr, Golbarg Esmaili, Isaac Shiri, Habib Zaidi
Unsupervised pseudo CT generation using heterogenous multicentric CT/MR images and CycleGAN: Dosimetric assessment for 3D conformal radiotherapy. Comput. Biol. Medicine 143 (2022)
Arman Rahmim, Amirhosein Toosi, Mohammad R. Salmanpour, Natalia Dubljevic, Ian Janzen, Isaac Shiri, Mohamad A. Ramezani, Ren Yuan, Cheryl Ho, Habib Zaidi, Calum MacAulay, Carlos Uribe, Fereshteh Yousefirizi
Tensor Radiomics: Paradigm for Systematic Incorporation of Multi-Flavoured Radiomics Features. CoRR (2022)
Amirhossein Sanaat, Isaac Shiri, Sohrab Ferdowsi, Hossein Arabi, Habib Zaidi
Robust-Deep: A Method for Increasing Brain Imaging Datasets to Improve Deep Learning Models' Performance and Robustness. J. Digit. Imaging 35 (3) (2022)
Isaac Shiri, Hossein Arabi, Yazdan Salimi, Amirhossein Sanaat, Azadeh Akhavanallaf, Ghasem Hajianfar, Dariush Askari, Shakiba Moradi, Zahra Mansouri, Masoumeh Pakbin, Saleh Sandoughdaran, Hamid Abdollahi, Amir Reza Radmard, Kiara Rezaei-Kalantari, Mostafa Ghelich Oghli, Habib Zaidi
COLI-Net: Deep learning-assisted fully automated COVID-19 lung and infection pneumonia lesion detection and segmentation from chest computed tomography images. Int. J. Imaging Syst. Technol. 32 (1) (2022)
Pegah Moradi Khaniabadi, Yassine Bouchareb, Humoud Al Dhuhli, Isaac Shiri, Faiza Al Kindi, Bita Moradi Khaniabadi, Habib Zaidi, Arman Rahmim
Two-step machine learning to diagnose and predict involvement of lungs in COVID-19 and pneumonia using CT radiomics. Comput. Biol. Medicine 150 (2022)
Vincent Andrearczyk, Valentin Oreiller, Moamen Abobakr, Azadeh Akhavanallaf, Panagiotis Balermpas, Sarah Boughdad, Leo Capriotti, Joël Castelli, Catherine Cheze Le Rest, Pierre Decazes, Ricardo Correia, Dina El-Habashy, Hesham Elhalawani, Clifton D. Fuller, Mario Jreige, Yomna Khamis, Agustina La Greca Saint-Esteven, Abdallah Mohamed, Mohamed Naser, John O. Prior, Su Ruan, Stephanie Tanadini-Lang, Olena Tankyevych, Yazdan Salimi, Martin Vallières, Pierre Vera, Dimitris Visvikis, Kareem Wahid, Habib Zaidi, Mathieu Hatt, Adrien Depeursinge
Overview of the HECKTOR Challenge at MICCAI 2022: Automatic Head and Neck Tumor Segmentation and Outcome Prediction in PET/CT. HECKTOR@MICCAI (2022)
Isaac Shiri, Yazdan Salimi, Masoumeh Pakbin, Ghasem Hajianfar, Atlas Haddadi Avval, Amirhossein Sanaat, Shayan Mostafaei, Azadeh Akhavanallaf, Abdollah Saberi, Zahra Mansouri, Dariush Askari, Mohammadreza Ghasemian, Ehsan Sharifipour, Saleh Sandoughdaran, Ahmad Sohrabi, Elham Sadati, Somayeh Livani, Pooya Iranpour, Shahriar Kolahi, Maziar Khateri, Salar Bijari, Mohammad Reza Atashzar, Sajad P. Shayesteh, Bardia Khosravi, Mohammadreza Babaei, Elnaz Jenabi, Mohammad Hasanian, Alireza Shahhamzeh, Seyaed Yaser Foroghi Ghomi, Abolfazl Mozafari, Arash Teimouri, Fatemeh Movaseghi, Azin Ahmari, Neda Goharpey, Rama Bozorgmehr, Hesamaddin Shirzad-Aski, Roozbeh Mortazavi, Jalal Karimi, Nazanin Mortazavi, Sima Besharat, Mandana Afsharpad, Hamid Abdollahi, Parham Geramifar, Amir Reza Radmard, Hossein Arabi, Kiara Rezaei-Kalantari, Mehrdad Oveisi, Arman Rahmim, Habib Zaidi
COVID-19 prognostic modeling using CT radiomic features and machine learning algorithms: Analysis of a multi-institutional dataset of 14, 339 patients. Comput. Biol. Medicine 145 (2022)
Isaac Shiri, Mehdi Amini, Mostafa Nazari, Ghasem Hajianfar, Atlas Haddadi Avval, Hamid Abdollahi, Mehrdad Oveisi, Hossein Arabi, Arman Rahmim, Habib Zaidi
Impact of feature harmonization on radiogenomics analysis: Prediction of EGFR and KRAS mutations from non-small cell lung cancer PET/CT images. Comput. Biol. Medicine 142 (2022)
Imene Mecheter, Maysam Abbod, Abbes Amira, Habib Zaidi
Deep learning with multiresolution handcrafted features for brain MRI segmentation. Artif. Intell. Medicine 131 (2022)
Imene Mecheter, Maysam Abbod, Habib Zaidi, Abbes Amira
Brain MR images segmentation using 3D CNN with features recalibration mechanism for segmented CT generation. Neurocomputing 491 (2022)
Yongbo Wang, Gaofeng Chen, Tao Xi, Zhaoying Bian, Dong Zeng, Habib Zaidi, Ji He, Jianhua Ma
Helical CT Reconstruction From Sparse-View Data Through Exploiting the 3D Anatomical Structure Sparsity. IEEE Access 9 (2021)
Zahra Khodabakhshi, Shayan Mostafaei, Hossein Arabi, Mehrdad Oveisi, Isaac Shiri, Habib Zaidi
Non-small cell lung carcinoma histopathological subtype phenotyping using high-dimensional multinomial multiclass CT radiomics signature. Comput. Biol. Medicine 136 (2021)
Yassine Bouchareb, Pegah Moradi Khaniabadi, Faiza Al Kindi, Humoud Al Dhuhli, Isaac Shiri, Habib Zaidi, Arman Rahmim
Artificial intelligence-driven assessment of radiological images for COVID-19. Comput. Biol. Medicine 136 (2021)
Mahsa Amirrashedi, Saeed Sarkar, Hossein Ghadiri, Pardis Ghafarian, Habib Zaidi, Mohammad Reza Ay
A Deep Neural Network To Recover Missing Data In Small Animal Pet Imaging: Comparison Between Sinogram- And Image-Domain Implementations. ISBI (2021)
Amirhossein Sanaat, Hossein Shooli, Sohrab Ferdowsi, Isaac Shiri, Hossein Arabi, Habib Zaidi
DeepTOFSino: A deep learning model for synthesizing full-dose time-of-flight bin sinograms from their corresponding low-dose sinograms. NeuroImage 245 (2021)
Zahra Khodabakhshi, Mehdi Amini, Shayan Mostafaei, Atlas Haddadi Avval, Mostafa Nazari, Mehrdad Oveisi, Isaac Shiri, Habib Zaidi
Overall Survival Prediction in Renal Cell Carcinoma Patients Using Computed Tomography Radiomic and Clinical Information. J. Digit. Imaging 34 (5) (2021)
Azadeh Akhavanallaf, Reza Mohammadi, Isaac Shiri, Yazdan Salimi, Hossein Arabi, Habib Zaidi
Personalized brachytherapy dose reconstruction using deep learning. Comput. Biol. Medicine 136 (2021)
Isaac Shiri, Majid Sorouri, Parham Geramifar, Mostafa Nazari, Mohammad Abdollahi, Yazdan Salimi, Bardia Khosravi, Dariush Askari, Leila Aghaghazvini, Ghasem Hajianfar, Amir Kasaeian, Hamid Abdollahi, Hossein Arabi, Arman Rahmim, Amir Reza Radmard, Habib Zaidi
Machine learning-based prognostic modeling using clinical data and quantitative radiomic features from chest CT images in COVID-19 patients. Comput. Biol. Medicine 132 (2021)
Mostafa Nazari, Isaac Shiri, Habib Zaidi
Radiomics-based machine learning model to predict risk of death within 5-years in clear cell renal cell carcinoma patients. Comput. Biol. Medicine 129 (2021)
Mahsa Amirrashedi, Saeed Sarkar, Hojjat Mamizadeh, Hossein Ghadiri, Pardis Ghafarian, Habib Zaidi, Mohammad Reza Ay
Leveraging deep neural networks to improve numerical and perceptual image quality in low-dose preclinical PET imaging. Comput. Medical Imaging Graph. 94 (2021)
Imene Mecheter, Abbes Amira, Maysam Abbod, Habib Zaidi
Deep Learning based Segmentation for Multi MR Imaging Protocols using Transfer Learning for PET Attenuation Correction. SSCI (2020)
Imene Mecheter, Abbes Amira, Maysam Abbod, Habib Zaidi
Brain MR Imaging Segmentation Using Convolutional Auto Encoder Network for PET Attenuation Correction. IntelliSys (3) (2020)
Hossein Arabi, Habib Zaidi
Deep learning-guided estimation of attenuation correction factors from time-of-flight PET emission data. Medical Image Anal. 64 (2020)
Hamidreza Khodajou-Chokami, Seyed Abolfazl Hosseini, Mohammad Reza Ay, Habib Zaidi
MCNP-FBSM: Development of MCNP/MCNPX Source Model for Simulation of Multi-Slice Fan-Beam X-Ray CT Scanners. MeMeA (2019)
Hamidreza Khodajou-Chokami, Seyed Abolfazl Hosseini, Mohammad Reza Ay, Ali Safarzadehamiri, Pardis Ghafarian, Habib Zaidi
A Novel Method for Measuring the MTF of CT Scanners: A Phantom Study. MeMeA (2019)
Nicolas A. Karakatsanis, Charalampos Tsoumpas, Habib Zaidi
Quantitative PET image reconstruction employing nested expectation-maximization deconvolution for motion compensation. Comput. Medical Imaging Graph. 60 (2017)
Abolfazl Mehranian, Habib Zaidi, Andrew J. Reader
MR-guided joint reconstruction of activity and attenuation in brain PET-MR. NeuroImage 162 (2017)
Hossein Arabi, Habib Zaidi
Comparison of atlas-based techniques for whole-body bone segmentation. Medical Image Anal. 36 (2017)
Abolfazl Mehranian, Hossein Arabi, Habib Zaidi
Quantitative analysis of MRI-guided attenuation correction techniques in time-of-flight brain PET/MRI. NeuroImage 130 (2016)
Hossein Arabi, Habib Zaidi
Magnetic resonance imaging-guided attenuation correction in whole-body PET/MRI using a sorted atlas approach. Medical Image Anal. 31 (2016)
Habib Zaidi, Minerva Becker
The Promise of Hybrid PET\/MRI: Technical advances and clinical applications. IEEE Signal Process. Mag. 33 (3) (2016)
Abolfazl Mehranian, Habib Zaidi
Joint Estimation of Activity and Attenuation in Whole-Body TOF PET/MRI Using Constrained Gaussian Mixture Models. IEEE Trans. Medical Imaging 34 (9) (2015)
Fotis A. Kotasidis, Charalampos Tsoumpas, Irene Polycarpou, Habib Zaidi
A 5D computational phantom for pharmacokinetic simulation studies in dynamic emission tomography. Comput. Medical Imaging Graph. 38 (8) (2014)
Abolfazl Mehranian, Mohammad Reza Ay, Arman Rahmim, Habib Zaidi
X-ray CT Metal Artifact Reduction Using Wavelet Domain $L_{0}$ Sparse Regularization. IEEE Trans. Medical Imaging 32 (9) (2013)
Tony Shepherd, Mika Teräs, Reinhard Beichel, Ronald Boellaard, Michel Bruynooghe, Volker Dicken, Mark J. Gooding, Peter J. Julyan, John Aldo Lee, Sébastien Lefèvre, Michael Mix, Valery Naranjo, Xiaodong Wu, Habib Zaidi, Ziming Zeng, Heikki Minn
Comparative Study With New Accuracy Metrics for Target Volume Contouring in PET Image Guided Radiation Therapy. IEEE Trans. Medical Imaging 31 (11) (2012)
Mhd Saeed Sharif, Maysam F. Abbod, Abbes Amira, Habib Zaidi
Artificial Neural Network-Statistical Approach for PET Volume Analysis and Classification. Adv. Fuzzy Syst. 2012 (2012)
Daniel Gutierrez, Marie-Louise Montandon, Frédéric Assal, Mohamed Allaoua, Osman Ratib, Karl-Olof Lövblad, Habib Zaidi
Anatomically guided voxel-based partial volume effect correction in brain PET: Impact of MRI segmentation. Comput. Medical Imaging Graph. 36 (8) (2012)
Maï Khuong Nguyen, Tuong T. Truong, Marcela A. Morvidone, Habib Zaidi
Scattered Radiation Emission Imaging: Principles and Applications. Int. J. Biomed. Imaging 2011 (2011)
Mohammad Saleh Nambakhsh, Alireza Ahmadian, Habib Zaidi
A contextual based double watermarking of PET images by patient ID and ECG signal. Comput. Methods Programs Biomed. 104 (3) (2011)
Marcela A. Morvidone, Maï Khuong Nguyen, Tuong T. Truong, Habib Zaidi
On the V-Line Radon Transform and Its Imaging Applications. Int. J. Biomed. Imaging 2010 (2010)
Marcela A. Morvidone, Tuong T. Truong, Maï Khuong Nguyen, Habib Zaidi
A novel V-line Radon transform and its imaging applications. ICIP (2010)
Mhd Saeed Sharif, Maysam F. Abbod, Abbes Amira, Habib Zaidi
Novel hybrid approach combining ANN and MRA for PET volume segmentation. APCCAS (2010)
Mhd Saeed Sharif, Abbes Amira, Habib Zaidi
Intelligent approach for PET volume analysis. ISCAS (2010)
Mhd Saeed Sharif, Maysam F. Abbod, Abbes Amira, Habib Zaidi
Artificial Neural Network-Based System for PET Volume Segmentation. Int. J. Biomed. Imaging 2010 (2010)
Mhd Saeed Sharif, Abbes Amira, Habib Zaidi
3D Oncological PET volume analysis using CNN and LVQNN. ISCAS (2010)
Habib Zaidi, Benjamin M. W. Tsui
Review of Computational Anthropomorphic Anatomical and Physiological Models. Proc. IEEE 97 (12) (2009)
Habib Zaidi, Mohammad Reza Ay
Current status and new horizons in Monte Carlo simulation of X-ray CT scanners. Medical Biol. Eng. Comput. 45 (9) (2007)
Habib Zaidi, Marie-Louise Montandon, Steve Meikle
Strategies for attenuation compensation in neurological PET studies. NeuroImage 34 (2) (2007)
Marie-Louise Montandon, Habib Zaidi
Quantitative analysis of template-based attenuation compensation in 3D brain PET. Comput. Medical Imaging Graph. 31 (1) (2007)
Tuong T. Truong, Maï Khuong Nguyen, Habib Zaidi
The Mathematical Foundations of 3D Compton Scatter Emission Imaging. Int. J. Biomed. Imaging 2007 (2007)
Abdel-Ouahab Boudraa, Jean-Christophe Cexus, Habib Zaidi
-energy operator. Comput. Methods Programs Biomed. 84 (2-3) (2006)
Habib Zaidi, Torsten Ruest, Frederic Schoenahl, Marie-Louise Montandon
Comparative assessment of statistical brain MR image segmentation algorithms and their impact on partial volume correction in PET. NeuroImage 32 (4) (2006)
Habib Zaidi
Medical image segmentation: Quo Vadis. Comput. Methods Programs Biomed. 84 (2-3) (2006)
Marie-Louise Montandon, Habib Zaidi
Atlas-guided non-uniform attenuation correction in cerebral 3D PET imaging. NeuroImage 25 (1) (2005)
Marie-Louise Montandon, Daniel O. Slosman, Habib Zaidi
F]-FDG 3D brain PET in healthy subjects using statistical parametric mapping. NeuroImage 20 (3) (2003)
Claire Labbé, Kris Thielemans, D. Belluzzo, Valentino Bettinardi, Maria Carla Gilardi, D. S. Hague, Matthew W. Jacobson, S. Kaiser, Roni Levkovitz, T. Margalit, Gautam Mitra, Christian Morel, Terry J. Spinks, Patrick Valente, Habib Zaidi, Alexey Zverovich
An Object-Oriented Library for 3D PET Reconstruction Using Parallel Computing. Bildverarbeitung für die Medizin (1999)
Habib Zaidi, Claire Labbé, Christian Morel
Implementation of an Environment for Monte Carlo Simulation of Fully 3-D Positron Tomography on a High-Performance Parallel Platform. Parallel Comput. 24 (9-10) (1998)