Gene J. Yu

Publication Activity (10 Years)

Years Active: 2012-2021
Publications (10 Years): 14

Top Topics

Dendritic Spines

Language Acquisition

Network Dynamics

Computational Model

Top Venues

Frontiers Comput. Neurosci.

IEEE Trans. Biomed. Eng.

Publications

Duy-Tan J. Pham, Gene J. Yu, Jean-Marie C. Bouteiller, Theodore W. Berger
Bridging Hierarchies in Multi-Scale Models of Neural Systems: Look-Up Tables Enable Computationally Efficient Simulations of Non-linear Synaptic Dynamics. Frontiers Comput. Neurosci. 15 (2021)
Adam Mergenthal, Jean-Marie C. Bouteiller, Gene J. Yu, Theodore W. Berger
A Computational Model of the Cholinergic Modulation of CA1 Pyramidal Cell Activity. Frontiers Comput. Neurosci. 14 (2020)
Zane Z. Chou, Gene J. Yu, Theodore W. Berger
Generation of Granule Cell Dendritic Morphologies by Estimating the Spatial Heterogeneity of Dendritic Branching. Frontiers Comput. Neurosci. 14 (2020)
Gene J. Yu, Jean-Marie C. Bouteiller, Theodore W. Berger
Topographic Organization of Correlation Along the Longitudinal and Transverse Axes in Rat Hippocampal CA3 Due to Excitatory Afferents. Frontiers Comput. Neurosci. 14 (2020)
Gene J. Yu, Zhicheng Feng, Theodore W. Berger
Network Activity Due to Topographic Organization of Schaffer Collaterals in a Large-Scale Model of Rat CA1. EMBC (2019)
Gene J. Yu, Jean-Marie C. Bouteiller, Dong Song, Theodore W. Berger
Axonal Anatomy Optimizes Spatial Encoding in the Rat Entorhinal-Dentate System: A Computational Study. IEEE Trans. Biomed. Eng. 66 (10) (2019)
Eric Y. Hu, Gene J. Yu, Dong Song, Jean-Marie C. Bouteiller, Theodore W. Berger
Modeling Nonlinear Synaptic Dynamics: A Laguerre-Volterra Network Framework for Improved Computational Efficiency in Large Scale Simulations. EMBC (2018)
Zane Z. Chou, Gene J. Yu, Theodore W. Berger
Point Process Filtering Estimates of Branching Rate for Neural Dendritic Morphology Generation. EMBC (2018)
Clayton S. Bingham, Kyle Loizos, Gene J. Yu, Andrew Gilbert, Jean-Marie C. Bouteiller, Dong Song, Gianluca Lazzi, Theodore W. Berger
Model-Based Analysis of Electrode Placement and Pulse Amplitude for Hippocampal Stimulation. IEEE Trans. Biomed. Eng. 65 (10) (2018)
Phillip J. Hendrickson, Gene J. Yu, Dong Song, Theodore W. Berger
A Million-Plus Neuron Model of the Hippocampal Dentate Gyrus: Critical Role for Topography in Determining Spatiotemporal Network Dynamics. IEEE Trans. Biomed. Eng. 63 (1) (2016)
Clayton S. Bingham, Kyle Loizos, Gene J. Yu, Andrew Gilbert, Jean-Marie Bouteiller, Dong Song, Gianluca Lazzi, Theodore W. Berger
A large-scale detailed neuronal model of electrical stimulation of the dentate gyrus and perforant path as a platform for electrode design and optimization. EMBC (2016)
Gene J. Yu, Dong Song, Theodore W. Berger
Place field detection using grid-based clustering in a large-scale computational model of the rat dentate gyrus. EMBC (2016)
Gene J. Yu, Phillip J. Hendrickson, Dong Song, Theodore W. Berger
Topography-dependent spatio-temporal correlations in the entorhinal-dentate-CA3 circuit in a large-scale computational model of the Rat Hippocampus. EMBC (2015)
Phillip J. Hendrickson, Gene J. Yu, Dong Song, Theodore W. Berger
A million-plus neuron model of the hippocampal dentate gyrus: Dependency of spatio-temporal network dynamics on topography. EMBC (2015)
Gene J. Yu, Dong Song, Theodore W. Berger
Implementation of the excitatory entorhinal-dentate-CA3 topography in a large-scale computational model of the rat hippocampus. EMBC (2014)
Gene J. Yu, Phillip J. Hendrickson, Brian S. Robinson, Dong Song, Theodore W. Berger
The role of topography in the transformation of spatiotemporal patterns by a large-scale, biologically realistic model of the rat dentate gyrus. EMBC (2013)
Phillip J. Hendrickson, Gene J. Yu, Brian S. Robinson, Dong Song, Theodore W. Berger
The contribution of relative activation levels between populations of cells to network activity in a large-scale biologically realistic model of the hippocampus. EMBC (2013)
Brian S. Robinson, Gene J. Yu, Phillip J. Hendrickson, Dong Song, Theodore W. Berger
Implementation of activity-dependent synaptic plasticity rules for a large-scale biologically realistic model of the hippocampus. EMBC (2012)
Phillip J. Hendrickson, Gene J. Yu, Brian S. Robinson, Dong Song, Theodore W. Berger
Towards a large-scale biologically realistic model of the hippocampus. EMBC (2012)
Gene J. Yu, Brian S. Robinson, Phillip J. Hendrickson, Dong Song, Theodore W. Berger
Implementation of topographically constrained connectivity for a large-scale biologically realistic model of the hippocampus. EMBC (2012)