Frederic D. Bushman

Publication Activity (10 Years)

Years Active: 2006-2020
Publications (10 Years): 3

Top Topics

Canonical Correlation Analysis

Protein Complexes

Statistical Power

Top Venues

Publications

Louis J. Taylor, Arwa Abbas, Frederic D. Bushman
grabseqs: simple downloading of reads and metadata from multiple next-generation sequencing data repositories. Bioinform. 36 (11) (2020)
Erik L. Clarke, Sesh A. Sundararaman, Stephanie N. Seifert, Frederic D. Bushman, Beatrice H. Hahn, Dustin Brisson
swga: a primer design toolkit for selective whole genome amplification. Bioinform. 33 (14) (2017)
Brendan J. Kelly, Robert Gross, Kyle Bittinger, Scott Sherrill-Mix, James D. Lewis, Ronald G. Collman, Frederic D. Bushman, Hongzhe Li
Power and sample-size estimation for microbiome studies using pairwise distances and PERMANOVA. Bioinform. 31 (15) (2015)
Charles C. Berry, Karen E. Ocwieja, Nirav Malani, Frederic D. Bushman
Comparing DNA integration site clusters with scan statistics. Bioinform. 30 (11) (2014)
Stefanie Jäger, Peter Cimermancic, Natali Gulbahce, Jeffrey R. Johnson, Kathryn E. McGovern, Starlynn C. Clarke, Michael Shales, Gaelle Mercenne, Lars Pache, Kathy Li, Hilda Hernandez, Gwendolyn M. Jang, Shoshannah L. Roth, Eyal Akiva, John Marlett, Melanie Stephens, Iván D'Orso, Jason Fernandes, Marie E. Fahey, Cathal Mahon, Anthony J. O'Donoghue, Aleksandar Todorovic, John H. Morris, David A. Maltby, Tom Alber, Gerard Cagney, Frederic D. Bushman, John A. Young, Sumit K. Chanda, Wesley I. Sundquist, Tanja Kortemme, Ryan D. Hernandez, Charles S. Craik, Alma Burlingame, Andrej Sali, Alan D. Frankel, Nevan J. Krogan
Global landscape of HIV-human protein complexes. Nat. 481 (7381) (2012)
Jun Chen, Kyle Bittinger, Emily S. Charlson, Christian Hoffmann, James D. Lewis, Gary D. Wu, Ronald G. Collman, Frederic D. Bushman, Hongzhe Li
Associating microbiome composition with environmental covariates using generalized UniFrac distances. Bioinform. 28 (16) (2012)
Charles C. Berry, Nicolas A. Gillet, Anat Melamed, Niall A. Gormley, Charles R. M. Bangham, Frederic D. Bushman
Estimating abundances of retroviral insertion sites from DNA fragment length data. Bioinform. 28 (6) (2012)
J. Gregory Caporaso, Kyle Bittinger, Frederic D. Bushman, Todd Z. DeSantis, Gary L. Andersen, Rob Knight
PyNAST: a flexible tool for aligning sequences to a template alignment. Bioinform. 26 (2) (2010)
Charles C. Berry, Sridhar Hannenhalli, Jeremy Leipzig, Frederic D. Bushman
Selection of Target Sites for Mobile DNA Integration in the Human Genome. PLoS Comput. Biol. 2 (11) (2006)