F. Marty Ytreberg

Publication Activity (10 Years)

Years Active: 2004-2023
Publications (10 Years): 5

Top Topics

Nonparametric Bayesian

Molecular Dynamics

Spectral Reflectance

Top Venues

J. Chem. Inf. Model.

PLoS Comput. Biol.

Publications

Yesol Sapozhnikov, Jagdish Suresh Patel, F. Marty Ytreberg, Craig R. Miller
Statistical modeling to quantify the uncertainty of FoldX-predicted protein folding and binding stability. BMC Bioinform. 24 (1) (2023)
Dharmeshkumar Patel, Stephanie L. Haag, Jagdish Suresh Patel, F. Marty Ytreberg, Matthew T. Bernards
Paired Simulations and Experimental Investigations into the Calcium-Dependent Conformation of Albumin. J. Chem. Inf. Model. 62 (5) (2022)
Christopher A. Mirabzadeh, F. Marty Ytreberg
Implementation of adaptive integration method for free energy calculations in molecular systems. PeerJ Comput. Sci. 6 (2020)
Christopher A. Mirabzadeh, F. Marty Ytreberg
Implementation of adaptive integration method for free energy calculations in molecular systems. PeerJ Prepr. 7 (2019)
Jagdish Suresh Patel, Celeste J. Brown, F. Marty Ytreberg, Deborah L. Stenkamp
Predicting peak spectral sensitivities of vertebrate cone visual pigments using atomistic molecular simulations. PLoS Comput. Biol. 14 (1) (2018)
Kuo-Hao Lee, F. Marty Ytreberg
Effect of Gold Nanoparticle Conjugation on Peptide Dynamics and Structure. Entropy 14 (4) (2012)
Conrad Shyu, F. Marty Ytreberg
Accurate estimation of solvation free energy using polynomial fitting techniques. J. Comput. Chem. 32 (1) (2011)
Conrad Shyu, F. Marty Ytreberg
Reducing the bias and uncertainty of free energy estimates by using regression to fit thermodynamic integration data. J. Comput. Chem. 30 (14) (2009)
F. Marty Ytreberg, Daniel M. Zuckerman
Efficient use of nonequilibrium measurement to estimate free energy differences for molecular systems. J. Comput. Chem. 25 (14) (2004)