F. Alex Feltus

Publication Activity (10 Years)

Years Active: 2010-2024
Publications (10 Years): 17

Top Topics

Gaussian Mixture Model

Top Venues

Database J. Biol. Databases Curation

Publications

Justin Presley, Xi Wang, Xusheng Ai, Tianyuan Yu, Tym Brandel, Proyash Podder, Varun Patil, Alex Afanasyev, F. Alex Feltus, Lixia Zhang, Susmit Shannigrahi
Hydra: A Scalable Decentralized P2P Storage Federation for Large Scientific Datasets. ICNC (2024)
Xi Wang, Xusheng Ai, F. Alex Feltus, Susmit Shannigrahi
GNSGA: A Decentralized Data Replication Algorithm for Big Science Data. IFIP Networking (2023)
David Reddick, F. Alex Feltus, Susmit Shannigrahi
Case Study of Attribute Based Access Control for Genomics Data Using Named Data Networking. CCNC (2022)
David Reddick, Justin Presley, F. Alex Feltus, Susmit Shannigrahi
AABAC - Automated Attribute Based Access Control for Genomics Data. CoRR (2022)
Justin Presley, Xi Wang, Tym Brandel, Xusheng Ai, Proyash Podder, Tianyuan Yu, Varun Patil, Lixia Zhang, Alex Afanasyev, F. Alex Feltus, Susmit Shannigrahi
Hydra - A Federated Data Repository over NDN. CoRR (2022)
John A. Hadish, Tyler Biggs, Benjamin T. Shealy, M. Reed Bender, Coleman McKnight, Connor Wytko, Melissa C. Smith, F. Alex Feltus, Loren A. Honaas, Stephen P. Ficklin
GEMmaker: process massive RNA-seq datasets on heterogeneous computational infrastructure. BMC Bioinform. 23 (1) (2022)
Josh J. R. Burns, Benjamin T. Shealy, Mitchell S. Greer, John A. Hadish, Matthew McGowan, Tyler Biggs, Melissa C. Smith, F. Alex Feltus, Stephen P. Ficklin
Addressing noise in co-expression network construction. Briefings Bioinform. 23 (1) (2022)
Cameron Ogle, David Reddick, Coleman McKnight, Tyler Biggs, Rini Pauly, Stephen P. Ficklin, F. Alex Feltus, Susmit Shannigrahi
Named Data Networking for Genomics Data Management and Integrated Workflows. Frontiers Big Data 4 (2021)
Benjamin T. Shealy, F. Alex Feltus, Melissa C. Smith
Intelligent Resource Provisioning for Scientific Workflows and HPC. WORKS (2021)
Colin Targonski, M. Reed Bender, Benjamin T. Shealy, Benafsh Husain, Bill Paseman, Melissa C. Smith, F. Alex Feltus
Cellular State Transformations Using Deep Learning for Precision Medicine Applications. Patterns 1 (6) (2020)
Shawna Spoor, Connor Wytko, Brian Soto, Ming Chen, Abdullah Almsaeed, Bradford Condon, Nic Herndon, Heidi Hough, Sook Jung, Meg Staton, Jill L. Wegrzyn, Dorrie Main, F. Alex Feltus, Stephen P. Ficklin
Tripal and Galaxy: supporting reproducible scientific workflows for community biological databases. Database J. Biol. Databases Curation 2020 (2020)
Benjamin T. Shealy, Josh J. R. Burns, Melissa C. Smith, F. Alex Feltus, Stephen P. Ficklin
GPU Implementation of Pairwise Gaussian Mixture Models for Multi-Modal Gene Co-Expression Networks. IEEE Access 7 (2019)
Shawna Spoor, Chun-Huai Cheng, Lacey-Anne Sanderson, Bradford Condon, Abdullah Almsaeed, Ming Chen, Anthony Bretaudeau, Helena Rasche, Sook Jung, Dorrie Main, Kirstin E. Bett, Margaret Staton, Jill L. Wegrzyn, F. Alex Feltus, Stephen P. Ficklin
Tripal v3: an ontology-based toolkit for construction of FAIR biological community databases. Database J. Biol. Databases Curation 2019 (2019)
Mats Rynge, Karan Vahi, Ewa Deelman, Anirban Mandal, Ilya Baldin, Omkar Bhide, Randy W. Heiland, Von Welch, Raquel Hill, William L. Poehlman, F. Alex Feltus
Integrity Protection for Scientific Workflow Data: Motivation and Initial Experiences. PEARC (2019)
Colin Targonski, Benjamin T. Shealy, Melissa C. Smith, F. Alex Feltus
Cellular State Transformations using Generative Adversarial Networks. CoRR (2019)
Nicholas Mills, F. Alex Feltus, Walter B. Ligon III
Maximizing the performance of scientific data transfer by optimizing the interface between parallel file systems and advanced research networks. Future Gener. Comput. Syst. 79 (2018)
Susmit Shannigrahi, Chengyu Fan, Christos Papadopoulos, F. Alex Feltus
NDN-SCI for managing large scale genomics data. ICN (2018)
F. Alex Feltus, Stephen P. Ficklin, Scott M. Gibson, Melissa C. Smith
Maximizing capture of gene co-expression relationships through pre-clustering of input expression samples: an Arabidopsis case study. BMC Syst. Biol. 7 (2013)
Lacey-Anne Sanderson, Stephen P. Ficklin, Chun-Huai Cheng, Sook Jung, F. Alex Feltus, Kirstin E. Bett, Dorrie Main
Tripal v1.1: a standards-based toolkit for construction of online genetic and genomic databases. Database J. Biol. Databases Curation 2013 (2013)
Bo Li, James Z. Wang, F. Alex Feltus, Jizhong Zhou, Feng Luo
Effectively integrating information content and structural relationship to improve the GO-based similarity measure between proteins CoRR (2010)
Bo Li, Feng Luo, James Z. Wang, F. Alex Feltus, Jizhong Zhou
Effectively Integrating Information Content and Structural Relationship to Improve the GO-based Similarity Measure Between Proteins. BIOCOMP (2010)
Xumeng Li, F. Alex Feltus, Xiaoqian Sun, James Zijun Wang, Feng Luo
A non-parameter Ising model for network-based identification of differentially expressed genes in recurrent breast cancer patients. BIBM (2010)