Erik Poppleton

Publication Activity (10 Years)

Years Active: 2019-2023
Publications (10 Years): 5

Top Topics

Rna Secondary Structure Prediction

Molecular Biology

Top Venues

Nucleic Acids Res.

J. Comput. Chem.

INFORMS J. Comput.

J. Open Source Softw.

Publications

Erik Poppleton, Michael Matthies, Debesh Mandal, Flavio Romano, Petr Sulc, Lorenzo Rovigatti
oxDNA: coarse-grained simulations of nucleic acids made simple. J. Open Source Softw. 8 (81) (2023)
Erik Poppleton, Aatmik Mallya, Swarup Dey, Joel Joseph, Petr Sulc
Nanobase.org: a repository for DNA and RNA nanostructures. Nucleic Acids Res. 50 (D1) (2022)
Menghan Liu, Erik Poppleton, Giulia Pedrielli, Petr Sulc, Dimitri P. Bertsekas
ExpertRNA: A New Framework for RNA Secondary Structure Prediction. INFORMS J. Comput. 34 (5) (2022)
Erik Poppleton, Roger Romero, Aatmik Mallya, Lorenzo Rovigatti, Petr Sulc
OxDNA.org: a public webserver for coarse-grained simulations of DNA and RNA nanostructures. Nucleic Acids Res. 49 (Webserver-Issue) (2021)
Antonio Suma, Erik Poppleton, Michael Matthies, Petr Sulc, Flavio Romano, Ard A. Louis, Jonathan P. K. Doye, Cristian Micheletti, Lorenzo Rovigatti
TacoxDNA: A user-friendly web server for simulations of complex DNA structures, from single strands to origami. J. Comput. Chem. 40 (29) (2019)